Evidence map›Paper›PMID 34671974›Full record

ArticleClinical genetics2022

The broader phenotypic spectrum of congenital caudal abnormalities associated with mutations in the caudal type homeobox 2 gene.

Servi J C Stevens, Constance T R M Stumpel, Karin E M Diderich, Marjon A van Slegtenhorst, Mary-Alice Abbott, Courtney Manning, Jorune Balciuniene, Louise C Pyle, Jacqueline Leonard, Jill R Murrell and 5 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Clinical genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  6. Novel inheritedCold Spring Harbor molecular case studies · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Servi J C StevensDepartment of Clinical Genetics, Maastricht University Medical Centre and GROW School for Oncology and Developmental Biology, Maastricht University, Maastricht, the Netherlands.ORCID 0000-0001-8769-3150
Constance T R M StumpelDepartment of Clinical Genetics, Maastricht University Medical Centre and GROW School for Oncology and Developmental Biology, Maastricht University, Maastricht, the Netherlands.
Karin E M DiderichDepartment of Clinical Genetics, Erasmus Medical Centre, Rotterdam, the Netherlands.
Marjon A van SlegtenhorstDepartment of Clinical Genetics, Erasmus Medical Centre, Rotterdam, the Netherlands.
Mary-Alice AbbottDepartment of Pediatrics, University of Massachusetts Medical School-Baystate, Springfield, Massachusetts, USA.
Courtney ManningDepartment of Pediatrics, University of Massachusetts Medical School-Baystate, Springfield, Massachusetts, USA.
Jorune BalciunieneDivision of Human Genetics and the Roberts Individualized Medical Genetics Center, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Louise C PyleDivision of Human Genetics and the Roberts Individualized Medical Genetics Center, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Jacqueline LeonardDivision of Human Genetics and the Roberts Individualized Medical Genetics Center, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Jill R MurrellDivision of Human Genetics and the Roberts Individualized Medical Genetics Center, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Romy van de PutteDepartment for Health Evidence, Radboud Institute for Health Sciences, Radboud University Medical Center, Nijmegen, the Netherlands.
Iris A L M van RooijDepartment for Health Evidence, Radboud Institute for Health Sciences, Radboud University Medical Center, Nijmegen, the Netherlands.
Alexander HoischenDepartment of Genetics, Radboud University Medical Centre, Nijmegen, the Netherlands.
Paul LaskoDepartment of Genetics, Radboud University Medical Centre, Nijmegen, the Netherlands.
Han G BrunnerDepartment of Clinical Genetics, Maastricht University Medical Centre and GROW School for Oncology and Developmental Biology, Maastricht University, Maastricht, the Netherlands.
Radboud University Nijmegen · NLChildren's Hospital of Philadelphia · USBaystate Medical Center · USErasmus MC · NLMaastricht University Medical Centre · NL

Funding

Institutional Clinical and Translational Science AwardKL2TR001879 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI MEAGHER, EMMA ANNE · 2016 to 2025
$13.7M
MEDICAL GENETICS RESEARCH TRAINING GRANTT32GM008638 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca Ganetzky · 1997 to 2026
$8.7M
Mechanisms and Fetal Origins Underlying Gonadal Germ Cell Tumor-AWARDEDK08CA248704 · NCI · CHILDREN'S RESEARCH INSTITUTE · PI PYLE, LOUISE CLARE · 2020 to 2024
$1.1M
NCATS NIH HHS KL2 TR001879NCI NIH HHS K08 CA248704NIGMS NIH HHS T32 GM008638
6 · The paper itself

Abstract

The caudal type homeobox 2 (CDX2) gene encodes a developmental regulator involved in caudal body patterning. Only three pathogenic variants in human CDX2 have been described, in patients with persistent cloaca, sirenomelia and/or renal and anogenital malformations. We identified five patients with de novo or inherited pathogenic variants in CDX2 with clinical phenotypes that partially overlap with previous cases, that is, imperforate anus and renal, urogenital and limb abnormalities. However, additional clinical features were seen including vertebral agenesis and we describe considerable phenotypic variability, even in unrelated patients with the same recurrent p.(Arg237His) variant. We propose CDX2 variants as rare genetic cause for a multiple congenital anomaly syndrome that can include features of caudal regression syndrome and VACTERL. A causative role is further substantiated by the relationship between CDX2 and other proteins encoded by genes that were previously linked to caudal abnormalities in humans, for example, TBXT (sacral agenesis and other vertebral segmentation defects) and CDX1 (anorectal malformations). Our findings confirm the essential role of CDX2 in caudal morphogenesis and formation of cloacal derivatives in humans, which to date has only been well characterized in animals.

Indexed as

Genetic Predisposition to DiseaseMutationPhenotypeAbnormalities, MultipleAllelesCDX2 Transcription FactorChildExome SequencingFemaleGenetic Association StudiesGenetic TestingGenotypeHumansInfantInfant, NewbornMaleCDX2 protein, humanCDX2 Transcription Factorcaudal regression syndromeCDX2homeobox geneimperforate anuspersistent cloacasirenomeliaVACTERL

Identifiers

PMID34671974
PMCPMC9153267
OpenAlexW3206918858

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.