Evidence map›Paper›PMID 34671746›Full record

ArticleCritical care explorations2021

A Transcriptomic Severity Metric That Predicts Clinical Outcomes in Critically Ill Surgical Sepsis Patients.

Scott C Brakenridge, Petr Starostik, Gabriella Ghita, Uros Midic, Dijoia Darden, Brittany Fenner, James Wacker, Philip A Efron, Oliver Liesenfeld, Timothy E Sweeney and 1 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Critical care explorations, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05639504 (Sepsis Prognosis and Diagnosis in the Emergency Department Using a Host Response Classifier), which is not on this map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05639504 withdrawnnot on this mapstarted 2022, after this paper: background citation

Sepsis Prognosis and Diagnosis in the Emergency Department Using a Host Response Classifier (SPEED) UK - a Multi-Centre Observational Study

TypeobservationalSponsorInflammatixRan2022 to 2023Enrolled0ConditionsRespiratory Tract Infections, Urinary Tract Infections, Intra-Abdominal Infections, Skin and Soft Tissue InfectionArmsIMX-BVN-4 and IMX-SEV-4
3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Scott C BrakenridgeSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
Petr StarostikMolecular Pathology Laboratory at Rocky Point, Department of Pathology, Immunology and Laboratory Medicine, University of Florida College of Medicine, and Clinical and Diagnostic Laboratories, Shands UF Health Science Center, Gainesville, FL.
Gabriella GhitaSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
Uros MidicInflammatix, Inc. Burlingame, CA.
Dijoia DardenSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
Brittany FennerSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
James WackerInflammatix, Inc. Burlingame, CA.
Philip A EfronSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
Oliver LiesenfeldInflammatix, Inc. Burlingame, CA.
Timothy E SweeneyInflammatix, Inc. Burlingame, CA.
Lyle L MoldawerSepsis and Critical Illness Research Center, Department of Surgery, University of Florida College of Medicine, Gainesville, FL.
Florida College · USUniversity of Florida · US

Funding

PICS: A New Horizon for Surgical Critical CareP50GM111152 · NIGMS · UNIVERSITY OF FLORIDA · PI MOORE, FREDERICK A · 2014 to 2018
$10.7M
Molecular Biology in Burns and TraumaT32GM008721 · NIGMS · UNIVERSITY OF FLORIDA · PI Philip A Efron · 1999 to 2026
$5.0M
NIGMS NIH HHS P50 GM111152NIGMS NIH HHS T32 GM008721
6 · The paper itself

Abstract

objectivesClinically deployable methods for the rapid and accurate prediction of sepsis severity that could elicit a meaningful change in clinical practice are currently lacking. We evaluated a whole-blood, multiplex host-messenger RNA expression metric, Inflammatix-Severity-2, for identifying septic, hospitalized patients' likelihood of 30-day mortality, development of chronic critical illness, discharge disposition, and/or secondary infections.

designRetrospective, validation cohort analysis.

settingSingle, academic health center ICU. PATIENTS: Three hundred thirty-five critically ill adult surgical patients with sepsis.

interventionsNone. MEASUREMENTS AND MAIN

resultsWhole blood was collected in PAXgene Blood RNA collection tubes at 24 hours after sepsis diagnosis and analyzed using a custom 29-messenger RNA classifier (Inflammatix-Severity-2) in a Clinical Laboratory Improvement Amendments certified diagnostic laboratory using the NanoString FLEX platform. Among patients meeting Sepsis-3 criteria, the Inflammatix-Severity-2 severity score was significantly better (

conclusionsThe Inflammatix-Severity-2 severity score was superior at predicting secondary infections and overall adverse clinical outcomes compared with other common metrics. Combining a rapidly measured transcriptomic metric with clinical or physiologic indices offers the potential to optimize risk-based resource utilization and patient management adjustments that may improve outcomes in surgical sepsis. Hospitalized patients who are septic and present with an elevated IMX-SEV2 severity score and preexisting comorbidities may be ideal candidates for clinical interventions aimed at reducing the risk of secondary infections and adverse clinical outcomes.

Indexed as

biomarkerscritical illnessgenomicsinnate immunityproteomicssepsis

Identifiers

PMID34671746
PMCPMC8522866
OpenAlexW3205272657

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.