Evidence map›Paper›PMID 34671736›Full record

ArticleRSC medicinal chemistry2021

Identification of a Zika NS2B epitope as a biomarker for severe clinical phenotypes.

Felix F Loeffler, Isabelle F T Viana, Nico Fischer, Danilo F Coêlho, Carolina S Silva, Antônio F Purificação, Catarina M C S Araújo, Bruno H S Leite, Ricardo Durães-Carvalho, Tereza Magalhães and 5 more

Open access · greenAbstract read
In one paragraph

Article in RSC medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Felix F LoefflerMax Planck Institute of Colloids and Interfaces, Department of Biomolecular Systems Potsdam Germany.ORCID https://orcid.org/0000-0002-8227-2522
Isabelle F T VianaDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.ORCID https://orcid.org/0000-0003-4648-6635
Nico FischerSection Clinical Tropical Medicine, Department of Infectious Diseases, Heidelberg University Hospital Germany thomas.jaenisch@urz.uni-heidelberg.de.
Danilo F CoêlhoDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.ORCID https://orcid.org/0000-0002-1111-0825
Carolina S SilvaDepartment of Chemical Engineering, Federal University of Pernambuco Recife PE Brazil.ORCID https://orcid.org/0000-0003-3868-3233
Antônio F PurificaçãoDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Catarina M C S AraújoDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Bruno H S LeiteDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Ricardo Durães-CarvalhoLaboratory of Virology, University of Campinas Campinas SP Brazil.ORCID https://orcid.org/0000-0001-5734-7601
Tereza MagalhãesDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Clarice N L MoraisDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Marli T CordeiroDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.
Roberto D LinsDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.ORCID https://orcid.org/0000-0002-3983-8025
Ernesto T A MarquesDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation Recife PE Brazil.ORCID https://orcid.org/0000-0003-3826-9358
Thomas JaenischSection Clinical Tropical Medicine, Department of Infectious Diseases, Heidelberg University Hospital Germany thomas.jaenisch@urz.uni-heidelberg.de.
Fundação Oswaldo Cruz · BRHeidelberg University · DEUniversidade Federal de Pernambuco · BRMax Planck Institute of Colloids and Interfaces · DEUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Pittsburgh · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of specific biomarkers for Zika infection and its clinical complications is fundamental to mitigate the infection spread, which has been associated with a broad range of neurological sequelae. We present the characterization of antibody responses in serum samples from individuals infected with Zika, presenting non-severe (classical) and severe (neurological disease) phenotypes, with high-density peptide arrays comprising the Zika NS1 and NS2B proteins. The data pinpoints one strongly IgG-targeted NS2B epitope in non-severe infections, which is absent in Zika patients, where infection progressed to the severe phenotype. This differential IgG profile between the studied groups was confirmed by multivariate data analysis. Molecular dynamics simulations and circular dichroism have shown that the peptide in solution presents itself in a sub-optimal conformation for antibody recognition, which led us to computationally engineer an artificial protein able to stabilize the NS2B epitope structure. The engineered protein was used to interrogate paired samples from mothers and their babies presenting Zika-associated microcephaly and confirmed the absence of NS2B IgG response in those samples. These findings suggest that the assessment of antibody responses to the herein identified NS2B epitope is a strong candidate biomarker for the diagnosis and prognosis of Zika-associated neurological disease.

Identifiers

PMID34671736
PMCPMC8459328
OpenAlexW3190767613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.