Evidence map›Paper›PMID 34671104›Full record

ArticleThe ISME journal2022

Indirect reduction of Ralstonia solanacearum via pathogen helper inhibition.

Mei Li, Thomas Pommier, Yue Yin, Jianing Wang, Shaohua Gu, Alexandre Jousset, Joost Keuskamp, Honggui Wang, Zhong Wei, Yangchun Xu and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 93 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Mei LiJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.
Thomas PommierUniv Lyon, Université Claude Bernard Lyon 1, CNRS, INRAE, VetAgro Sup, UMR Ecologie Microbienne, F-69622, Villeurbanne, France.ORCID http://orcid.org/0000-0003-2986-5326
Yue YinJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.
Jianing WangJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.
Shaohua GuCenter for Quantitative Biology and Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, PR China.
Alexandre JoussetJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.ORCID http://orcid.org/0000-0002-6805-2486
Joost KeuskampInstitute for Environmental Biology, Ecology & Biodiversity, Utrecht University, Padualaan 8, 3584CH, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0002-5007-0117
Honggui WangSchool of Environmental Science and Engineering, Yangzhou University, 225127, Yangzhou, Jiangsu, PR China.
Zhong WeiJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China. weizhong@njau.edu.cn.ORCID http://orcid.org/0000-0002-7967-4897
Yangchun XuJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.ORCID http://orcid.org/0000-0003-2740-5561
Qirong ShenJiangsu Provincial Key Lab for Organic Solid Waste Utilization, Key Lab of Plant Immunity, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, 210095, Nanjing, PR China.
George A KowalchukInstitute for Environmental Biology, Ecology & Biodiversity, Utrecht University, Padualaan 8, 3584CH, Utrecht, The Netherlands.
Nanjing Agricultural University · CNUtrecht University · NLPeking University · CNUniversité Claude Bernard Lyon 1 · FRYangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rhizosphere microbiome forms a first line of defense against soilborne pathogens. To date, most microbiome enhancement strategies have relied on bioaugmentation with antagonistic microorganisms that directly inhibit pathogens. Previous studies have shown that some root-associated bacteria are able to facilitate pathogen growth. We therefore hypothesized that inhibiting such pathogen helpers may help reduce pathogen densities. We examined tripartite interactions between a model pathogen, Ralstonia solanacearum, two model helper strains and a collection of 46 bacterial isolates recovered from the tomato rhizosphere. This system allowed us to examine the importance of direct (effects of rhizobacteria on pathogen growth) and indirect (effects of rhizobacteria on helper growth) pathways affecting pathogen growth. We found that the interaction between rhizosphere isolates and the helper strains was the major determinant of pathogen suppression both in vitro and in vivo. We therefore propose that controlling microbiome composition to prevent the growth of pathogen helpers may become part of sustainable strategies for pathogen control.

Indexed as

MicrobiotaRalstonia solanacearumSolanum lycopersicumPlant DiseasesRhizosphere

Identifiers

PMID34671104
PMCPMC8857195
OpenAlexW3205463474

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.