Evidence map›Paper›PMID 34670657›Full record

ArticleEmerging infectious diseases2021

Emergence of Vibrio cholerae O1 Sequence Type 75, South Africa, 2018-2020.

Anthony M Smith, François-Xavier Weill, Elisabeth Njamkepo, Hlengiwe M Ngomane, Ntsieni Ramalwa, Phuti Sekwadi, Juno Thomas

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Genomic analysis ofEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Imported Cholera Cases, South Africa, 2023.Emerging infectious diseases · 2023
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anthony M Smith
François-Xavier Weill
Elisabeth Njamkepo
Hlengiwe M Ngomane
Ntsieni Ramalwa
Phuti Sekwadi
Juno Thomas

Funding

Department of Health
6 · The paper itself

Abstract

We describe the molecular epidemiology of cholera in South Africa during 2018-2020. Vibrio cholerae O1 sequence type (ST) 75 recently emerged and became more prevalent than the V. cholerae O1 biotype El Tor pandemic clone. ST75 isolates were found across large spatial and temporal distances, suggesting local ST75 spread.

Indexed as

CholeraVibrio cholerae O1Disease OutbreaksHumansMolecular EpidemiologySouth Africaantimicrobial resistancebacteriaenteric infectionsO1sequence type 75South AfricaST75Vibrio cholerae

Identifiers

PMID34670657
PMCPMC8544974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.