Evidence map›Paper›PMID 34669519›Full record

ArticleJournal of virology2022

Transcriptomic Landscape of Gene Expression Profiles and Pathways in Juvenile-Onset Recurrent Respiratory Papillomatosis Tumor Tissues and Human Papillomavirus 6 and 11 E6- and E7-Overexpressing Head and Neck Squamous Cell Carcinoma Cell Lines.

Xunyao Wu, Yang Xiao, Sihan Zhou, Yuge Wang, Jun Wang

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. HPV11 targeting KDM4A regulates the polarization of macrophage MCell communication and signaling : CCS · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Xunyao WuClinical Biobank, Department of Medical Research Center, Peking Union Medical College Hospitalgrid.413106.1, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yang XiaoDepartment of Otolaryngology Head and Neck Surgery, Beijing Tongren Hospitalgrid.414373.6, Capital Medical University, Beijing, China.ORCID 0000-0002-8067-3154
Sihan ZhouDepartment of Otolaryngology Head and Neck Surgery, Beijing Tongren Hospitalgrid.414373.6, Capital Medical University, Beijing, China.
Yuge WangDepartment of Otolaryngology Head and Neck Surgery, Beijing Tongren Hospitalgrid.414373.6, Capital Medical University, Beijing, China.
Jun WangDepartment of Otolaryngology Head and Neck Surgery, Beijing Tongren Hospitalgrid.414373.6, Capital Medical University, Beijing, China.
Capital Medical University · CNBeijing Tongren Hospital · CNPeking Union Medical College Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Juvenile-onset recurrent respiratory papillomatosis (JORRP) is the most common benign laryngeal neoplasm in children and is considered to be primarily caused by human papillomavirus (HPV) types 6 and 11. In the present study, we performed RNA sequencing (RNA-seq) of 8 tumors and 4 adjacent nontumor tissues to explore the transcriptional profiles of JORRP tumors. A total of 1,151 upregulated genes involved in the interleukin-17 (IL-17) signaling pathway and 1,620 downregulated genes involved in dysregulated inflammatory responses were reported. Immunohistochemistry (IHC) assays confirmed the upregulation of IL-17C in JORRP tumors compared with paired adjacent nontumor tissues. Real-time PCR (RT-PCR) assays showed positive correlations between CXCL1 (CXC chemokine ligands 1) and CXCL8 and the Derkay Clinic Score of JORRP patients. We further overexpressed the HPV6 or HPV11 E6 and E7 oncogenes in SNU-1076 head and neck squamous cell carcinoma (HNSCC) cell lines and carried out RNA-seq. We found that HPV6-E6-E7 gene overexpression resulted in only 16 upregulated genes and 1 downregulated gene; however, HPV11-E6-E7 gene overexpression resulted in 1,776 upregulated genes and 461 downregulated genes compared with the control cell lines. The differentially expressed genes (DEGs) of HPV11-E6-E7 gene overexpression were positively enriched in the DNA replication-related terms by Gene Ontology (GO) analysis and the IL-17 signaling pathway by Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. Taken together, our present findings revealed IL-17 signaling pathway-related gene profiles that might contribute to disease pathogenesis and that the HPV11 E6 and E7 oncogenes promote disease progression by enhancing tumor growth and activating the IL-17 signaling pathway in JORRP patients.

Indexed as

AdolescentCell Line, TumorChildChild, PreschoolFemaleHead and Neck NeoplasmsHuman papillomavirus 11Human papillomavirus 6HumansInterleukin-17MaleOncogene Proteins, ViralPapillomavirus InfectionsRespiratory Tract InfectionsSignal TransductionSquamous Cell Carcinoma of Head and NeckInterleukin-17Oncogene Proteins, ViralE6 and E7 oncogenehuman papillomavirusIL-17 signaling pathwayjuvenile-onset recurrent respiratory papillomatosisRNA sequencing

Identifiers

PMID34669519
PMCPMC8791248
OpenAlexW3205785087

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.