Evidence map›Paper›PMID 34669281›Full record

ArticleBiomedica : revista del Instituto Nacional de Salud2021

Immune characterization of a Colombian family cluster with SARS-CoV-2 infection.

Wbeimar Aguilar-Jiménez, Lizdany Flórez-Álvarez, Daniel S Rincón, Damariz Marín-Palma, Alexandra Sánchez-Martínez, Jahnnyer Martínez, María Isabel Zapata, John D Loaiza, Constanza Cárdenas, Fanny Guzmán and 6 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Biomedica : revista del Instituto Nacional de Salud, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Burden of disease of COVID-19 in the department of Nariño, Colombia, 2020-2021.Revista peruana de medicina experimental y salud publica
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Wbeimar Aguilar-JiménezGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. wbeimar.aguilar@udea.edu.co.
Lizdany Flórez-ÁlvarezGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. liz.1.florez@gmail.com.
Daniel S RincónGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. daniel.rincon1993@gmail.com.
Damariz Marín-PalmaGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. bleidy1122@gmail.com.
Alexandra Sánchez-MartínezGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. alexandra.sanchezm@udea.edu.co.
Jahnnyer MartínezGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Grupo de Salud y Comunidad, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. jahnnyer20@gmail.com.
María Isabel ZapataGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. mariaisab5@gmail.com.
John D LoaizaGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. jdario.loaiza@udea.edu.co.
Constanza CárdenasNúcleo de Biotecnología Curauma, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile. constanza.cardenas@pucv.cl.
Fanny GuzmánNúcleo de Biotecnología Curauma, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile. fanny.guzman@pucv.cl.
Paula A VelillaGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. pvelilla@gmail.com.
Natalia A TabordaGrupo de Investigaciones Biomédicas Uniremington, Programa de Medicina, Facultad de Ciencias de la Salud, Corporación Universitaria Remington, Medellín, Colombia. natalia.taborda@uniremington.edu.co.
Wildeman ZapataGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Grupo Infettare, Facultad de Medicina, Universidad Cooperativa de Colombia, Medellín, Colombia. wzbuiles@gmail.com.
Juan C HernándezGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Grupo Infettare, Facultad de Medicina, Universidad Cooperativa de Colombia, Medellín, Colombia. juankhernandez@gmail.com.
Francisco J DíazGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. francisco.diaz@udea.edu.co.
María T RugelesGrupo de Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. maria.rugeles@udea.edu.co.
Universidad de Antioquia · COPontificia Universidad Católica de Valparaíso · CLCorporación Universitaria Remington · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionImmunological markers have been described during COVID-19 and persist after recovery. These immune markers are associated with clinical features among SARSCoV-2 infected individuals. Nevertheless, studies reporting a comprehensive analysis of the immune changes occurring during SARS-CoV-2 infection are still limited.

objectiveTo evaluate the production of proinflammatory cytokines, the antibody response, and the phenotype and function of NK cells and T cells in a Colombian family cluster with SARS-CoV-2 infection. MATERIALS AND

methodsProinflammatory cytokines were evaluated by RT-PCR and ELISA. The frequency, phenotype, and function of NK cells (cocultures with K562 cells) and T-cells (stimulated with spike/RdRp peptides) were assessed by flow cytometry. Anti-SARS-CoV-2 antibodies were determined using indirect immunofluorescence and plaque reduction neutralization assay.

resultsDuring COVID-19, we observed a high proinflammatory-cytokine production and a reduced CD56bright-NK cell and cytotoxic response. Compared with healthy controls, infected individuals had a higher frequency of dysfunctional CD8+ T cells CD38+HLA-DR-. During the acute phase, CD8+ T cells stimulated with viral peptides exhibited a monofunctional response characterized by high IL-10 production. However, during recovery, we observed a bifunctional response characterized by the co-expression of CD107a and granzyme B or perforin.

conclusionAlthough the proinflammatory response is a hallmark of SARS-CoV-2 infection, other phenotypic and functional alterations in NK cells and CD8+ T cells could be associated with the outcome of COVID-19. However, additional studies are required to understand these alterations and to guide future immunotherapy strategies.

Indexed as

Killer Cells, NaturalT-LymphocytesAdultAntibodies, ViralCase-Control StudiesCD56 AntigenColombiaCOVID-19Family HealthGranzymesHumansInterleukin-10Interleukin-1betaInterleukin-6Interleukin-8K562 CellsAntibodies, ViralCD56 AntigenGranzymesInterleukin-10Interleukin-1betaInterleukin-6Interleukin-8NCAM1 protein, humanPerforinReceptors, CCR7Tumor Necrosis Factor-alphaantibodiesCoronavirus infectionsinflammationkiller cellsnaturalneutralizingT-lymphocytes

Identifiers

PMID34669281
PMCPMC8604040
OpenAlexW3168253277

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.