Evidence map›Paper›PMID 34668730›Full record

ArticleMolecular biology of the cell2021

Loss of major nutrient sensing and signaling pathways suppresses starvation lethality in electron transport chain mutants.

Alisha G Lewis, Robert Caldwell, Jason V Rogers, Maria Ingaramo, Rebecca Y Wang, Ilya Soifer, David G Hendrickson, R Scott McIsaac, David Botstein, Patrick A Gibney

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Alisha G LewisDepartment of Food Science, Cornell University, Ithaca, NY 14853.
Robert CaldwellCalico Life Sciences LLC, South San Francisco, CA 94080.
Jason V RogersCalico Life Sciences LLC, South San Francisco, CA 94080.
Maria IngaramoCalico Life Sciences LLC, South San Francisco, CA 94080.
Rebecca Y WangCalico Life Sciences LLC, South San Francisco, CA 94080.
Ilya SoiferCalico Life Sciences LLC, South San Francisco, CA 94080.
David G HendricksonCalico Life Sciences LLC, South San Francisco, CA 94080.
R Scott McIsaacCalico Life Sciences LLC, South San Francisco, CA 94080.
David BotsteinCalico Life Sciences LLC, South San Francisco, CA 94080.
Patrick A GibneyDepartment of Food Science, Cornell University, Ithaca, NY 14853.
Cornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The electron transport chain (ETC) is a well-studied and highly conserved metabolic pathway that produces ATP through generation of a proton gradient across the inner mitochondrial membrane coupled to oxidative phosphorylation. ETC mutations are associated with a wide array of human disease conditions and to aging-related phenotypes in a number of different organisms. In this study, we sought to better understand the role of the ETC in aging using a yeast model. A panel of ETC mutant strains that fail to survive starvation was used to isolate suppressor mutants that survive. These suppressors tend to fall into major nutrient sensing and signaling pathways, suggesting that the ETC is involved in proper starvation signaling to these pathways in yeast. These suppressors also partially restore ETC-associated gene expression and pH homeostasis defects, though it remains unclear whether these phenotypes directly cause the suppression or are simply effects. This work further highlights the complex cellular network connections between metabolic pathways and signaling events in the cell and their potential roles in aging and age-related diseases.

Indexed as

MutationCytosolElectron TransportGene Expression Regulation, FungalGenome, MitochondrialGlucoseHydrogen-Ion ConcentrationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTranscription FactorsGlucoseSaccharomyces cerevisiae ProteinsTORC1 protein complex, S cerevisiaeTranscription Factors

Identifiers

PMID34668730
PMCPMC8694083
OpenAlexW3207561211

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.