Evidence map›Paper›PMID 34668514›Full record

ArticleCardiovascular research2022

Ogfod1 deletion increases cardiac beta-alanine levels and protects mice against ischaemia- reperfusion injury.

Michael Harris, Junhui Sun, Karen Keeran, Angel Aponte, Komudi Singh, Danielle Springer, Marjan Gucek, Mehdi Pirooznia, Matthew E Cockman, Elizabeth Murphy and 1 more

Open access · greenAbstract read
In one paragraph

Article in Cardiovascular research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Michael HarrisCardiovascular Branch, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-8494-2497
Junhui SunCardiovascular Branch, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-1816-1190
Karen KeeranAnimal Surgery and Resources Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Angel AponteProteomics Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-5684-2715
Komudi SinghBioinformatics and Computational Biology Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-6413-541X
Danielle SpringerMurine Phenotyping Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Marjan GucekProteomics Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-7890-2520
Mehdi PiroozniaBioinformatics and Computational Biology Core Facility, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-4210-6458
Matthew E CockmanThe Francis Crick Institute, London, UK.ORCID 0000-0002-3310-4821
Elizabeth MurphyCardiovascular Branch, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-9400-0797
Leslie M KennedyCardiovascular Branch, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0003-1750-6422
National Institutes of Health · USThe Francis Crick Institute · GB

Funding

Proteomics CoreZICHL005903 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI GUCEK, MARJAN · 2009 to 2022
$23.3M
Mechanisms of cardiac ischemia-reperfusion injury and cardioprotectionZIAHL002066 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI MURPHY, ELIZABETH · 2009 to 2025
$20.4M
Murine Phenotyping CoreZIGHL006190 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI SPRINGER, DANIELLE · 2014 to 2025
$15.2M
Mechanisms of cardiac ischemia-reperfusion injury and cardioprotectionZ01HL002066 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI MURPHY, ELIZABETH · 2008 to 2008
$607k
Investigating Novel Mechanisms Regulating Translation in the Normal and Diseased HeartZIAHL006272 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI KENNEDY, LESLIE · 2022 to 2022
$114k
Intramural NIH HHS Z01 HL002066Medical Research Council FC001501Wellcome Trust FC001501
6 · The paper itself

Abstract

aimsProlyl hydroxylation is a post-translational modification that regulates protein stability, turnover, and activity. The proteins that catalyze prolyl hydroxylation belong to the 2-oxoglutarate- and iron-dependent oxygenase family of proteins. 2-oxoglutarate- and iron-dependent oxygenase domain-containing protein 1 (Ogfod1), which hydroxylates a proline in ribosomal protein s23 is a newly described member of this family. The aims of this study were to investigate roles for Ogfod1 in the heart, and in the heart's response to stress. METHODS AND

resultsWe isolated hearts from wild-type (WT) and Ogfod1 knockout (KO) mice and performed quantitative proteomics using tandem mass Tag labelling coupled to liquid chromatography and tandem mass spectrometry (LC-MS/MS) to identify protein changes. Ingenuity pathway analysis identified 'Urate Biosynthesis/Inosine 5'-phosphate Degradation' and 'Purine Nucleotides Degradation II (Aerobic)' as the most significantly enriched pathways. We performed metabolomics analysis and found that both purine and pyrimidine pathways were altered with the purine nucleotide inosine 5'-monophosphate showing a 3.5-fold enrichment in KO hearts (P = 0.011) and the pyrimidine catabolism product beta-alanine showing a 1.7-fold enrichment in KO hearts (P = 0.014). As changes in these pathways have been shown to contribute to cardioprotection, we subjected isolated perfused hearts to ischaemia and reperfusion (I/R). KO hearts showed a 41.4% decrease in infarct size and a 34% improvement in cardiac function compared to WT hearts. This protection was also evident in an in vivo I/R model. Additionally, our data show that treating isolated perfused WT hearts with carnosine, a metabolite of beta-alanine, improved protection in the context of I/R injury, whereas treating KO hearts with carnosine had no impact on recovery of function or infarct size.

conclusionsTaken together, these data show that Ogfod1 deletion alters the myocardial proteome and metabolome to confer protection against I/R injury.

Indexed as

CarnosineCarrier ProteinsMyocardial Reperfusion InjuryNuclear ProteinsAnimalsbeta-AlanineChromatography, LiquidInfarctionInosineIronIschemiaKetoglutaric AcidsMiceMice, KnockoutNucleotidesOxygenasesbeta-AlanineCarnosineCarrier ProteinsInosineIronKetoglutaric AcidsNuclear ProteinsNucleotidesOxygenasesPhosphatesProlineProteomePurine NucleotidesPyrimidinesRibosomal ProteinsUric AcidCardioprotectionIschaemia–reperfusion injuryMetabolomicsNucleotide metabolismProteomics

Identifiers

PMID34668514
PMCPMC9586564
OpenAlexW3207375859

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.