Evidence map›Paper›PMID 34667860›Full record

ArticleLaryngoscope investigative otolaryngology2021

Targeted molecular characterization of external auditory canal squamous cell carcinomas.

Gregory J Basura, Joshua D Smith, Susan Ellsperman, Apurva Bhangale, John Chad Brenner

Open access · goldAbstract read
In one paragraph

Article in Laryngoscope investigative otolaryngology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gregory J BasuraDepartment of Otolaryngology-Head and Neck Surgery University of Michigan Medical School Ann Arbor Michigan USA.ORCID https://orcid.org/0000-0002-5574-7385
Joshua D SmithDepartment of Otolaryngology-Head and Neck Surgery University of Michigan Medical School Ann Arbor Michigan USA.ORCID https://orcid.org/0000-0002-2076-7589
Susan EllspermanDepartment of Otolaryngology-Head and Neck Surgery University of Michigan Medical School Ann Arbor Michigan USA.ORCID https://orcid.org/0000-0003-1683-9778
Apurva BhangaleDepartment of Otolaryngology-Head and Neck Surgery University of Michigan Medical School Ann Arbor Michigan USA.
John Chad BrennerDepartment of Otolaryngology-Head and Neck Surgery University of Michigan Medical School Ann Arbor Michigan USA.
University of Michigan · US

Funding

Novel Cilia Trafficking MechanismsR01DK084725 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARGOLIS, BENJAMIN L · 2009 to 2010
$702k
NIDDK NIH HHS R01 DK084725
6 · The paper itself

Abstract

hypothesisSquamous cell carcinomas (SCC) of the external auditory canal (EAC) may harbor unique genomic alterations that may explain aggressive behavior and differentiate these tumors from cutaneous SCCs of other subsites.

backgroundEAC SCCs arise in a non-ultraviolet-exposed region of the head and neck, are often locally aggressive and may metastasize to lymph nodes or distant sites. The genomic alterations underlying cutaneous SCC of other sites are well-documented; however, mutational profiles of EAC SCC are less well characterized and may contribute to the unique anatomic site, high rates of recurrence and tumor spread. We performed targeted sequencing of a cohort of primary EAC SCCs to identify recurring and potentially targetable genomic alterations.

methodsGenomic DNA was extracted from formalin-fixed paraffin-embedded specimens of 7 EAC SCCs and subjected to targeted DNA sequencing using a 227-gene panel. Somatic alterations and gene copy number alterations were annotated using our validated, in-house bioinformatics pipelines.

resultsIn our EAC SCCs, we found recurrent alterations in

conclusionThese data represent the first step toward precise molecular characterization of EAC SCCs that may lead to an enhanced understanding of tumor biology and modernized precision medicine approaches for unique tumors.Level of Evidence: NA.

Indexed as

DNMT1external auditory canal (EAC)PI3Ksquamous cell carcinoma (SCC)TERT

Identifiers

PMID34667860
PMCPMC8513438
OpenAlexW3200669587

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.