Evidence map›Paper›PMID 34667119›Full record

ArticleGenome research2021

Effective sequence similarity detection with strobemers.

Kristoffer Sahlin

Open access · greenAbstract read
In one paragraph

Article in Genome research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 95 citations in OpenAlex.

  1. Min-frame transformation enables more sensitive viral genome alignment.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. MELO-ED: learning locality-sensitive multi-embeddings for edit distance.bioRxiv : the preprint server for biology · 2025
    Article
  10. Edit Distance Embedding with Genomic Large Language Model.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. GreedyMini: generating low-density DNA minimizers.Bioinformatics (Oxford, England) · 2025
    Article
  13. Article
  14. NEAR: neural embeddings for amino acid relationships.Bioinformatics (Oxford, England) · 2025
    Article
  15. Article
  16. Review
  17. Sequence similarity estimation by random subsequence sketching.bioRxiv : the preprint server for biology · 2025
    Article
  18. Article
  19. NEAR: Neural Embeddings for Amino acid Relationships.bioRxiv : the preprint server for biology · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Kristoffer SahlinDepartment of Mathematics, Science for Life Laboratory, Stockholm University, 10691 Stockholm, Sweden.ORCID 0000-0001-7378-2320
Stockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AlgorithmsComputational BiologyHigh-Throughput Nucleotide SequencingSequence Analysis, DNASoftware

Identifiers

PMID34667119
PMCPMC8559714
OpenAlexW3206657624

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.