Evidence map›Paper›PMID 34666194›Full record

ArticleMedical image analysis2022

Quantitative characterization of the human retinotopic map based on quasiconformal mapping.

Duyan Ta, Yanshuai Tu, Zhong-Lin Lu, Yalin Wang

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Medical image analysis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. qPRF: A system to accelerate population receptive field decoding.bioRxiv : the preprint server for biology · 2024
    Article
  6. ENHANCING 3T RETINOTOPIC MAPS USING DIFFEOMORPHIC REGISTRATION.Proceedings. IEEE International Symposium on Biomedical Imaging · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Topology-preserving smoothing of retinotopic maps.PLoS computational biology · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Duyan TaSchool of Computing and Augmented Intelligence, Arizona State University, Tempe, AZ, USA.
Yanshuai TuSchool of Computing and Augmented Intelligence, Arizona State University, Tempe, AZ, USA.
Zhong-Lin LuDivision of Arts and Sciences, New York University Shanghai, Shanghai, China; Center for Neural Science and Department of Psychology, New York University, New York, NY, USA; NYU-ECNU Institute of Brain and Cognitive Science at NYU Shanghai, Shanghai, China.
Yalin WangSchool of Computing and Augmented Intelligence, Arizona State University, Tempe, AZ, USA. Electronic address: ylwang@asu.edu.
Arizona State University · USNew York University Shanghai · CN

Funding

Early joint cranial and brain development from fetal and pediatric imagingR01DE030286 · NIDCR · CHILDREN'S HOSPITAL OF LOS ANGELES · PI LEPORE, NATASHA, LINGURARU, MARIUS GEORGE · 2021 to 2025
$3.5M
Multi-Source Sparse Learning to Identify MCI and Predict DeclineRF1AG051710 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THOMPSON, PAUL M, WANG, YALIN · 2016 to 2016
$2.8M
Predicting the early childhood outcomes of preterm brain shape abnormalitiesR01EB025032 · NIBIB · CHILDREN'S HOSPITAL OF LOS ANGELES · PI LEPORE, NATASHA · 2017 to 2020
$2.6M
Hierarchical Bayesian Analysis of Retinotopic Maps of the Human Visual Cortex with Conformal GeometryR01EY032125 · NEI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LU, ZHONG-LIN, WANG, YALIN · 2021 to 2024
$1.2M
Developing a Univariate Neurodegeneration Imaging Biomarker with Optimal TransportationR21AG065942 · NIA · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, YALIN · 2020 to 2020
$445k
NEI NIH HHS R01 EY032125NIA NIH HHS R21 AG065942NIA NIH HHS RF1 AG051710NIBIB NIH HHS R01 EB025032NIDCR NIH HHS R01 DE030286
6 · The paper itself

Abstract

The retinotopic map depicts the cortical neurons' response to visual stimuli on the retina and has contributed significantly to our understanding of human visual system. Although recent advances in high field functional magnetic resonance imaging (fMRI) have made it possible to generate the in vivo retinotopic map with great detail, quantifying the map remains challenging. Existing quantification methods do not preserve surface topology and often introduce large geometric distortions to the map. In this study, we developed a new framework based on computational conformal geometry and quasiconformal Teichmüller theory to quantify the retinotopic map. Specifically, we introduced a general pipeline, consisting of cortical surface conformal parameterization, surface-spline-based cortical activation signal smoothing, and vertex-wise Beltrami coefficient-based map description. After correcting most of the violations of the topological conditions, the result was a "Beltrami coefficient map" (BCM) that rigorously and completely characterizes the retinotopic map by quantifying the local quasiconformal mapping distortion at each visual field location. The BCM provided topological and fully reconstructable retinotopic maps. We successfully applied the new framework to analyze the V1 retinotopic maps from the Human Connectome Project (n=181), the largest state of the art retinotopy dataset currently available. With unprecedented precision, we found that the V1 retinotopic map was quasiconformal and the local mapping distortions were similar across observers. The new framework can be applied to other visual areas and retinotopic maps of individuals with and without eye diseases, and improve our understanding of visual cortical organization in normal and clinical populations.

Indexed as

ConnectomeVisual CortexBrain MappingHumansMagnetic Resonance ImagingRetinaVisual FieldsBeltrami coefficientCortical surface conformal parameterizationFunctional magnetic resonance imaging (fMRI)Quasiconformal mapsRetinotopic maps

Identifiers

PMID34666194
PMCPMC8678293
OpenAlexW3203278308

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.