Evidence map›Paper›PMID 34665919›Full record

ArticleMolecular oncology2022

The transcribed ultraconserved region uc.160+ enhances processing and A-to-I editing of the miR-376 cluster: hypermethylation improves glioma prognosis.

Marta Soler, Veronica Davalos, Anaís Sánchez-Castillo, Carlos Mora-Martinez, Fernando Setién, Edilene Siqueira, Manuel Castro de Moura, Manel Esteller, Sonia Guil

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. ncRNA Editing: Functional Characterization and Computational Resources.Methods in molecular biology (Clifton, N.J.) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Marta SolerJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.ORCID 0000-0002-6656-957X
Veronica DavalosJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.
Anaís Sánchez-CastilloDepartment of Radiation Oncology (MAASTRO), GROW School for Oncology and Developmental Biology, Maastricht University Medical Center, The Netherlands.
Carlos Mora-MartinezCentre of Excellence in Experimental and Computational Developmental Biology, Institute of Biotechnology, University of Helsinki, Finland.
Fernando SetiénJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.
Edilene SiqueiraJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.ORCID 0000-0002-8838-2570
Manuel Castro de MouraJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.
Manel EstellerJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.ORCID 0000-0003-4490-6093
Sonia GuilJosep Carreras Leukaemia Research Institute (IJC), Barcelona, Spain.ORCID 0000-0002-2257-3331
Josep Carreras Leukaemia Research Institute · ESInstitució Catalana de Recerca i Estudis Avançats · ESMaastricht University · NLNational Council for Scientific and Technological Development · BRUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcribed ultraconserved regions (T-UCRs) are noncoding RNAs derived from DNA sequences that are entirely conserved across species. Their expression is altered in many tumor types, and, although a role for T-UCRs as regulators of gene expression has been proposed, their functions remain largely unknown. Herein, we describe the epigenetic silencing of the uc.160+ T-UCR in gliomas and mechanistically define a novel RNA-RNA regulatory network in which uc.160+ modulates the biogenesis of several members of the miR-376 cluster. This includes the positive regulation of primary microRNA (pri-miRNA) cleavage and an enhanced A-to-I editing on its mature sequence. As a consequence, the expression of uc.160+ affects the downstream, miR-376-regulated genes, including the transcriptional coregulators RING1 and YY1-binding protein (RYBP) and forkhead box P2 (FOXP2). Finally, we elucidate the clinical impact of our findings, showing that hypermethylation of the uc.160+ CpG island is an independent prognostic factor associated with better overall survival in lower-grade gliomas, highlighting the importance of T-UCRs in cancer pathophysiology.

Indexed as

DNA MethylationGliomaMicroRNAsConserved SequenceCpG IslandsHumansMicroRNAsMIRN376C microRNA, humanA-to-I editinggliomamiR-376noncoding RNApri-miRNA biogenesisT-UCR

Identifiers

PMID34665919
PMCPMC8807354
OpenAlexW3205629556

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.