Evidence map›Paper›PMID 34665822›Full record

ArticlePloS one2021

Rapid estimation of photosynthetic leaf traits of tropical plants in diverse environmental conditions using reflectance spectroscopy.

Julien Lamour, Kenneth J Davidson, Kim S Ely, Jeremiah A Anderson, Alistair Rogers, Jin Wu, Shawn P Serbin

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Julien LamourEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.ORCID 0000-0002-4410-507X
Kenneth J DavidsonEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.
Kim S ElyEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.
Jeremiah A AndersonEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.
Alistair RogersEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.
Jin WuDivision of Ecology and Biodiversity, School of Biological Sciences, University of Hong Kong, Hong Kong, China.
Shawn P SerbinEnvironmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tropical forests are one of the main carbon sinks on Earth, but the magnitude of CO2 absorbed by tropical vegetation remains uncertain. Terrestrial biosphere models (TBMs) are commonly used to estimate the CO2 absorbed by forests, but their performance is highly sensitive to the parameterization of processes that control leaf-level CO2 exchange. Direct measurements of leaf respiratory and photosynthetic traits that determine vegetation CO2 fluxes are critical, but traditional approaches are time-consuming. Reflectance spectroscopy can be a viable alternative for the estimation of these traits and, because data collection is markedly quicker than traditional gas exchange, the approach can enable the rapid assembly of large datasets. However, the application of spectroscopy to estimate photosynthetic traits across a wide range of tropical species, leaf ages and light environments has not been extensively studied. Here, we used leaf reflectance spectroscopy together with partial least-squares regression (PLSR) modeling to estimate leaf respiration (Rdark25), the maximum rate of carboxylation by the enzyme Rubisco (Vcmax25), the maximum rate of electron transport (Jmax25), and the triose phosphate utilization rate (Tp25), all normalized to 25°C. We collected data from three tropical forest sites and included leaves from fifty-three species sampled at different leaf phenological stages and different leaf light environments. Our resulting spectra-trait models validated on randomly sampled data showed good predictive performance for Vcmax25, Jmax25, Tp25 and Rdark25 (RMSE of 13, 20, 1.5 and 0.3 μmol m-2 s-1, and R2 of 0.74, 0.73, 0.64 and 0.58, respectively). The models showed similar performance when applied to leaves of species not included in the training dataset, illustrating that the approach is robust for capturing the main axes of trait variation in tropical species. We discuss the utility of the spectra-trait and traditional gas exchange approaches for enhancing tropical plant trait studies and improving the parameterization of TBMs.

Indexed as

PhotosynthesisCell RespirationElectron TransportForestsLeast-Squares AnalysisPanamaPlant LeavesPlant ProteinsRibulose-Bisphosphate CarboxylaseTropical ClimatePlant ProteinsRibulose-Bisphosphate Carboxylase

Identifiers

PMID34665822
PMCPMC8525780

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.