Evidence map›Paper›PMID 34665148›Full record

Observational studyJournal of medical Internet research2021

Detecting Parkinson Disease Using a Web-Based Speech Task: Observational Study.

Wasifur Rahman, Sangwu Lee, Md Saiful Islam, Victor Nikhil Antony, Harshil Ratnu, Mohammad Rafayet Ali, Abdullah Al Mamun, Ellen Wagner, Stella Jensen-Roberts, Emma Waddell and 12 more

Abstract readObservational Study
In one paragraph

Observational study in Journal of medical Internet research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Wasifur Rahman *Department of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0002-9736-442X
Sangwu Lee *Department of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0003-3930-3079
Md Saiful IslamDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0003-3725-3493
Victor Nikhil AntonyDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0003-4722-2041
Harshil RatnuDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0003-4791-1867
Mohammad Rafayet AliDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0002-7878-7910
Abdullah Al MamunDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0001-8757-9948
Ellen WagnerCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-7388-8504
Stella Jensen-RobertsCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-7269-3502
Emma WaddellCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-8863-0335
Taylor MyersCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-8223-2483
Meghan PawlikCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-9025-0382
Julia SotoCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-7885-862X
Madeleine CoffeyCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-9939-4414
Aayush SarkarCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-3603-1533
Ruth SchneiderCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-8094-4041
Christopher TarolliCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0003-0422-4020
Karlo LizarragaCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0001-9766-6252
Jamie AdamsCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-1170-6688
Max A LittleSchool of Computer Science, University of Birmingham, Birmingham, United Kingdom.ORCID 0000-0002-1507-3822
E Ray DorseyCenter for Health and Technology, University of Rochester Medical Center, Rochester, NY, United States.ORCID 0000-0002-5140-1248
Ehsan HoqueDepartment of Computer Science, University of Rochester, Rochester, NY, United States.ORCID 0000-0003-4781-4733

Funding

The Clinical Core will support in-person and virtual research visits for three of the four Research Projects at the University of Rochester Udall CenterP50NS108676 · NINDS · UNIVERSITY OF ROCHESTER · PI DORSEY, EARL RAY · 2018 to 2022
$9.2M
NINDS NIH HHS P50 NS108676
6 · The paper itself

Abstract

backgroundAccess to neurological care for Parkinson disease (PD) is a rare privilege for millions of people worldwide, especially in resource-limited countries. In 2013, there were just 1200 neurologists in India for a population of 1.3 billion people; in Africa, the average population per neurologist exceeds 3.3 million people. In contrast, 60,000 people receive a diagnosis of PD every year in the United States alone, and similar patterns of rising PD cases-fueled mostly by environmental pollution and an aging population-can be seen worldwide. The current projection of more than 12 million patients with PD worldwide by 2040 is only part of the picture given that more than 20% of patients with PD remain undiagnosed. Timely diagnosis and frequent assessment are key to ensure timely and appropriate medical intervention, thus improving the quality of life of patients with PD.

objectiveIn this paper, we propose a web-based framework that can help anyone anywhere around the world record a short speech task and analyze the recorded data to screen for PD.

methodsWe collected data from 726 unique participants (PD: 262/726, 36.1% were women; non-PD: 464/726, 63.9% were women; average age 61 years) from all over the United States and beyond. A small portion of the data (approximately 54/726, 7.4%) was collected in a laboratory setting to compare the performance of the models trained with noisy home environment data against high-quality laboratory-environment data. The participants were instructed to utter a popular pangram containing all the letters in the English alphabet, "the quick brown fox jumps over the lazy dog." We extracted both standard acoustic features (mel-frequency cepstral coefficients and jitter and shimmer variants) and deep learning-based embedding features from the speech data. Using these features, we trained several machine learning algorithms. We also applied model interpretation techniques such as Shapley additive explanations to ascertain the importance of each feature in determining the model's output.

resultsWe achieved an area under the curve of 0.753 for determining the presence of self-reported PD by modeling the standard acoustic features through the XGBoost-a gradient-boosted decision tree model. Further analysis revealed that the widely used mel-frequency cepstral coefficient features and a subset of previously validated dysphonia features designed for detecting PD from a verbal phonation task (pronouncing "ahh") influence the model's decision the most.

conclusionsOur model performed equally well on data collected in a controlled laboratory environment and in the wild across different gender and age groups. Using this tool, we can collect data from almost anyone anywhere with an audio-enabled device and help the participants screen for PD remotely, contributing to equity and access in neurological care.

Indexed as

DysphoniaParkinson DiseaseAgedHumansInternetQuality of LifeSpeechimproving access and equity in health caremobile phoneParkinson’s diseasespeech analysis

Identifiers

PMID34665148
PMCPMC8564663

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.