Evidence map›Paper›PMID 34664742›Full record

ArticleGenetic epidemiology2022

Penalized mediation models for multivariate data.

Daniel J Schaid, Ozan Dikilitas, Jason P Sinnwell, Iftikhar J Kullo

Open access · greenAbstract read
In one paragraph

Article in Genetic epidemiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Daniel J SchaidDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0003-1457-6433
Ozan DikilitasDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0002-9906-8608
Jason P SinnwellDepartment of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0003-1964-5522
Iftikhar J KulloDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0002-6524-3471
Mayo Clinic · USMayo Clinic in Florida · US

Funding

Quantitative Methods for Genetic EpidemiologyR01GM065450 · NIGMS · MAYO CLINIC ROCHESTER · PI SCHAID, DANIEL J. · 2002 to 2020
$5.6M
Quantitative Methods for Genetic EpidemiologyR35GM140487 · NIGMS · MAYO CLINIC ROCHESTER · PI SCHAID, DANIEL J. · 2021 to 2025
$1.9M
NIGMS NIH HHS R01 GM065450NIGMS NIH HHS R35 GM140487
6 · The paper itself

Abstract

Statistical methods to integrate multiple layers of data, from exposures to intermediate traits to outcome variables, are needed to guide interpretation of complex data sets for which variables are likely contributing in a causal pathway from exposure to outcome. Statistical mediation analysis based on structural equation models provide a general modeling framework, yet they can be difficult to apply to high-dimensional data and they are not automated to select the best fitting model. To overcome these limitations, we developed novel algorithms and software to simultaneously evaluate multiple exposure variables, multiple intermediate traits, and multiple outcome variables. Our penalized mediation models are computationally efficient and simulations demonstrate that they produce reliable results for large data sets. Application of our methods to a study of vascular disease demonstrates their utility to identify novel direct effects of single-nucleotide polymorphisms (SNPs) on coronary heart disease and peripheral artery disease, while disentangling the effects of SNPs on the intermediate risk factors including lipids, cigarette smoking, systolic blood pressure, and type 2 diabetes.

Indexed as

Diabetes Mellitus, Type 2AlgorithmsHumansModels, GeneticModels, StatisticalPhenotypeSoftwarecardiovascular diseasedata integrationL1 penaltymediation analysisstructural equation model

Identifiers

PMID34664742
PMCPMC8900147
OpenAlexW3207851555

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.