Evidence map›Paper›PMID 34663987›Full record

ArticleNature medicine2021

Mutations and variants of ONECUT1 in diabetes.

Anne Philippi, Sandra Heller, Ivan G Costa, Valérie Senée, Markus Breunig, Zhijian Li, Gino Kwon, Ronan Russell, Anett Illing, Qiong Lin and 30 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Nature medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 56 citations in OpenAlex.

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  12. Neonatal diabetes mellitus around the world: Update 2024.Journal of diabetes investigation · 2024
    Review
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  16. The Changing Landscape of Neonatal Diabetes Mellitus in Italy Between 2003 and 2022.The Journal of clinical endocrinology and metabolism · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 13 institutions in 7 countries.

Anne Philippi *Université de Paris, Institut Cochin, INSERM U1016, CNRS UMR-8104, Paris, France.
Sandra Heller *Department of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0002-8704-2646
Ivan G Costa *Institute for Computational Genomics, RWTH Aachen University Medical School, Aachen, Germany.ORCID http://orcid.org/0000-0003-2890-8697
Valérie Senée *Université de Paris, Institut Cochin, INSERM U1016, CNRS UMR-8104, Paris, France.ORCID http://orcid.org/0000-0001-7012-3944
Markus BreunigDepartment of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0002-2817-1974
Zhijian LiInstitute for Computational Genomics, RWTH Aachen University Medical School, Aachen, Germany.
Gino KwonDepartment of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0002-4269-6638
Ronan RussellDiabetes Center at the University of California, San Francisco, CA, USA.
Anett IllingDepartment of Internal Medicine I, Ulm University, Ulm, Germany.
Qiong LinInstitute for Computational Genomics, RWTH Aachen University Medical School, Aachen, Germany.
Meike HohwielerDepartment of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0002-0640-0764
Anne DegavreUniversité de Paris, Institut Cochin, INSERM U1016, CNRS UMR-8104, Paris, France.
Pierre ZallouaSchool of Medicine, University of Balamand, Amioun, Lebanon.ORCID http://orcid.org/0000-0002-8494-5081
Stefan LiebauInstitute of Neuroanatomy & Developmental Biology, Eberhard Karls University Tuebingen, Tuebingen, Germany.
Michael SchusterCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID http://orcid.org/0000-0003-2975-8969
Johannes KrummChair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany.
Xi ZhangDepartment of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0001-6485-4564
Ryan GeuszPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.
Jacqueline R BenthuysenPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.
Allen WangPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.
Joshua ChiouPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-4618-0647
Kyle GaultonPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.ORCID http://orcid.org/0000-0003-1318-7161
Heike NeubauerCardioMetabolic Diseases Research, Boehringer Ingelheim Pharma GmbH & Co KG, Biberach, Germany.
Eric SimonGlobal Computational Biology and Digital Sciences, Boehringer Ingelheim Pharma GmbH & Co KG, Biberach, Germany.
Thomas KleinCardioMetabolic Diseases Research, Boehringer Ingelheim Pharma GmbH & Co KG, Biberach, Germany.
Martin WagnerDepartment of Internal Medicine I, Ulm University, Ulm, Germany.ORCID http://orcid.org/0000-0001-5735-3462
Gopika NairDiabetes Center at the University of California, San Francisco, CA, USA.
Céline BesseCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, Commissariat à l'Energie Atomique, Université Paris-Saclay, Evry, France.
Claire Dandine-RoullandCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, Commissariat à l'Energie Atomique, Université Paris-Saclay, Evry, France.
Robert OlasoCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, Commissariat à l'Energie Atomique, Université Paris-Saclay, Evry, France.
Jean-François DeleuzeCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, Commissariat à l'Energie Atomique, Université Paris-Saclay, Evry, France.
Bernhard KusterChair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany.ORCID http://orcid.org/0000-0002-9094-1677
Matthias HebrokDiabetes Center at the University of California, San Francisco, CA, USA.
Thomas SeufferleinDepartment of Internal Medicine I, Ulm University, Ulm, Germany.
Maike SanderPediatric Diabetes Research Center (PDRC) at the University of California, San Diego, CA, USA.ORCID http://orcid.org/0000-0001-5308-7785
Bernhard O BoehmLKC School of Medicine, Nanyang Technological University, Singapore, Singapore.ORCID http://orcid.org/0000-0002-2706-7710
Franz OswaldDepartment of Internal Medicine I, Ulm University, Ulm, Germany.
Marc Nicolino *Service d'Endocrinologie et Diabétologie Pédiatriques et Centre PRISIS, Pathologies Rares de l'Insulino-Sécrétion et de l'Insulino-Sensibilité, Hôpital Femme-Mère-Enfant, Hospices Civils de Lyon, Bron, France.
Cécile Julier *Université de Paris, Institut Cochin, INSERM U1016, CNRS UMR-8104, Paris, France. cecile.julier@inserm.fr.ORCID http://orcid.org/0000-0002-1538-0240
Alexander Kleger *Department of Internal Medicine I, Ulm University, Ulm, Germany. alexander.kleger@uni-ulm.de.ORCID http://orcid.org/0000-0003-0592-5232
Universität Ulm · DEUniversity of California San Diego · USCentre National de la Recherche Scientifique · FRUniversité Paris-Saclay · FRBoehringer Ingelheim (Germany) · DERWTH Aachen University · DEUniversity of California, San Francisco · USTechnical University of Munich · DEAustrian Academy of Sciences · ATHôpital Femme Mère Enfant · FRNanyang Technological University · SGUniversity of Balamand · LBUniversity of Tübingen · DE

Funding

Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Nkx6 gene function in pancreas developmentR01DK068471 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI WORTHAM, MATTHEW · 2004 to 2024
$6.6M
Functional Analysis of T2D Associated Non-coding SNPsU01DK105541 · NIDDK · LUDWIG INSTITUTE FOR CANCER RES LTD · PI FRAZER, KELLY A, REN, BING · 2015 to 2019
$4.6M
Regulation of beta cell identity and dedifferentiationR01DK105831 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HEBROK, MATTHIAS · 2015 to 2022
$2.9M
Dissecting the impact of forced displacement on Type Two DiabetesR21TW010790 · FIC · LEBANESE AMERICAN UNIVERSITY · PI QI, LU, ZALLOUA, PIERRE · 2018 to 2019
$308k
NIDDK NIH HHS R01 DK068471NIDDK NIH HHS R01 DK105831NIDDK NIH HHS U01 DK105541NIGMS NIH HHS T32 GM008666
6 · The paper itself

Abstract

Genes involved in distinct diabetes types suggest shared disease mechanisms. Here we show that One Cut Homeobox 1 (ONECUT1) mutations cause monogenic recessive syndromic diabetes in two unrelated patients, characterized by intrauterine growth retardation, pancreas hypoplasia and gallbladder agenesis/hypoplasia, and early-onset diabetes in heterozygous relatives. Heterozygous carriers of rare coding variants of ONECUT1 define a distinctive subgroup of diabetic patients with early-onset, nonautoimmune diabetes, who respond well to diabetes treatment. In addition, common regulatory ONECUT1 variants are associated with multifactorial type 2 diabetes. Directed differentiation of human pluripotent stem cells revealed that loss of ONECUT1 impairs pancreatic progenitor formation and a subsequent endocrine program. Loss of ONECUT1 altered transcription factor binding and enhancer activity and NKX2.2/NKX6.1 expression in pancreatic progenitor cells. Collectively, we demonstrate that ONECUT1 controls a transcriptional and epigenetic machinery regulating endocrine development, involved in a spectrum of diabetes, encompassing monogenic (recessive and dominant) as well as multifactorial inheritance. Our findings highlight the broad contribution of ONECUT1 in diabetes pathogenesis, marking an important step toward precision diabetes medicine.

Indexed as

Cell DifferentiationCongenital AbnormalitiesDiabetes Mellitus, Type 2Fetal Growth RetardationGallbladderHepatocyte Nuclear Factor 6Homeobox Protein Nkx-2.2Homeodomain ProteinsHumansInfantInfant, NewbornMaleMultifactorial InheritanceOrganogenesisPancreasPancreatic DiseasesHepatocyte Nuclear Factor 6Homeobox Protein Nkx-2.2Homeodomain ProteinsNKX6-1 protein, humanONECUT1 protein, human

Identifiers

PMID34663987
PMCPMC9356324
OpenAlexW3207946156

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.