Evidence map›Paper›PMID 34661887›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2022

Norovirus GII and astrovirus in shellfish from a mangrove region in Cananéia, Brazil: molecular detection and characterization.

Andrea Vasquez-García, Julian Eduardo Mejia-Ballesteros, Silvia Helena Seraphin de Godoy, Edison Barbieri, Ricardo Luiz Moro de Sousa, Andrezza Maria Fernandes

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Human norovirus in Brazil: an update of reports in different settings.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Andrea Vasquez-GarcíaFaculdade de Zootecnia E Engenharia de Alimentos, Universidade de São Paulo, Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.ORCID http://orcid.org/0000-0002-6387-3269
Julian Eduardo Mejia-BallesterosFaculdade de Zootecnia E Engenharia de Alimentos, Universidade de São Paulo, Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.ORCID http://orcid.org/0000-0003-1051-4411
Silvia Helena Seraphin de GodoyFaculdade de Zootecnia E Engenharia de Alimentos, Universidade de São Paulo, Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Edison BarbieriInstituto de Pesca - APTA-SAA/SP. Prof, Besnard s/n, Cananéia, SP, 11990-000, Brazil.ORCID http://orcid.org/0000-0002-7423-3726
Ricardo Luiz Moro de SousaFaculdade de Zootecnia E Engenharia de Alimentos, Universidade de São Paulo, Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Andrezza Maria FernandesFaculdade de Zootecnia E Engenharia de Alimentos, Universidade de São Paulo, Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil. andrezzaf@usp.br.ORCID http://orcid.org/0000-0001-6701-750X
Universidade de São Paulo · BRInstituto de Pesca · BR

Funding

Capes Doctoral scholarship
6 · The paper itself

Abstract

In recent years, annual cases of gastroenteritis have been reported in the world at high rates, suggesting an association with the consumption of shellfish with enteric viruses in their tissues. Anthropic activities are considered a source of environmental pollution and the main responsible for contamination by pathogenic microorganisms in aquatic environments. The objective of this study was to evaluate, by RT-semi-nested PCR, the presence of astrovirus (AstV) and norovirus genogroup II (NoV GII) in mussels (Mytella falcata) and oysters (Crassostrea brasiliana) collected in two sites of the Lagunar Complex of Cananéia, State of São Paulo, Brazil. A total of 150 samples of mussels and oysters (75 samples each) were analyzed. AstV was not identified in any shellfish sample. NoV GII was detected in 21 samples (14%), 8 mussel samples (38%), and 13 oyster samples (62%). From the 21 positive samples, 16 were analyzed by nucleotide sequencing. The molecular characterization revealed that Brazilian samples were grouped into clades along with other sequences from Brazil, Japan, and Mexico. There was 93.8-100% amino acid sequence similarity among the samples in this study and > 94.9% when compared with the strains isolated from clinical cases in Brazil. The screening of shellfish for the presence of health-significant enteric viruses can help prevent outbreaks among consumers and contribute to the improvement of the estuarine environment.

Indexed as

GastroenteritisNorovirusOstreidaeAnimalsBrazilGenotypeShellfishEnteric virusEstuarineFood safetyMusselsNoVOysters

Identifiers

PMID34661887
PMCPMC8882523
OpenAlexW3207619138

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.