Evidence map›Paper›PMID 34655277›Full record

ArticleFEBS open bio2022

Implications of divergence of methionine adenosyltransferase in archaea.

Bhanu Pratap Singh Chouhan, Madhuri Gade, Desirae Martinez, Saacnicteh Toledo-Patino, Paola Laurino

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Inhibition ofACS omega · 2025
    Article
  2. Inhibition ofbioRxiv : the preprint server for biology · 2025
    Article
  3. Order of amino acid recruitment into the genetic code resolved by last universal common ancestor's protein domains.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Bhanu Pratap Singh ChouhanProtein Engineering and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Japan.
Madhuri GadeProtein Engineering and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Japan.
Desirae MartinezProtein Engineering and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Japan.
Saacnicteh Toledo-PatinoProtein Engineering and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Japan.
Paola LaurinoProtein Engineering and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Japan.ORCID 0000-0002-3725-2645
Okinawa Institute of Science and Technology Graduate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methionine adenosyltransferase (MAT) catalyzes the biosynthesis of S-adenosyl methionine from l-methionine and ATP. MAT enzymes are ancient, believed to share a common ancestor, and are highly conserved in all three domains of life. However, the sequences of archaeal MATs show considerable divergence compared with their bacterial and eukaryotic counterparts. Furthermore, the structural significance and functional significance of this sequence divergence are not well understood. In the present study, we employed structural analysis and ancestral sequence reconstruction to investigate archaeal MAT divergence. We observed that the dimer interface containing the active site (which is usually well conserved) diverged considerably between the bacterial/eukaryotic MATs and archaeal MAT. A detailed investigation of the available structures supports the sequence analysis outcome: The protein domains and subdomains of bacterial and eukaryotic MAT are more similar than those of archaea. Finally, we resurrected archaeal MAT ancestors. Interestingly, archaeal MAT ancestors show substrate specificity, which is lost during evolution. This observation supports the hypothesis of a common MAT ancestor for the three domains of life. In conclusion, we have demonstrated that archaeal MAT is an ideal system for studying an enzyme family that evolved differently in one domain compared with others while maintaining the same catalytic activity.

Indexed as

ArchaeaMethionine AdenosyltransferaseCatalytic DomainMethionineS-AdenosylmethionineMethionineMethionine AdenosyltransferaseS-Adenosylmethionineancestral sequence reconstructioncatalytic interfacedivergenceenzyme evolutionmethionine adenosyltransferase

Identifiers

PMID34655277
PMCPMC8727953
OpenAlexW3206983502

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.