Evidence map›Paper›PMID 34655019›Full record

ArticleMolecular biology reports2022

How long does the mRNA remains stable in untreated whole bovine blood?

Rodrigo Giglioti, Bianca Tainá Azevedo, Henrique Nunes de Oliveira, Luciana Morita Katiki, Anibal Eugênio Vercesi Filho, Márcia Cristina de Sena Oliveira, Cintia Hiromi Okino

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In one paragraph

Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Rodrigo GigliotiInstituto de Zootecnia, Rua Heitor Penteado, n. 56, Nova Odessa, São Paulo, 13380 011, Brazil.
Bianca Tainá AzevedoInstituto de Zootecnia, Rua Heitor Penteado, n. 56, Nova Odessa, São Paulo, 13380 011, Brazil.
Henrique Nunes de OliveiraUniversidade Estadual Júlio de Mesquita Filho, Unesp, Jaboticabal, São Paulo, 14884‑900, Brazil.
Luciana Morita KatikiInstituto de Zootecnia, Rua Heitor Penteado, n. 56, Nova Odessa, São Paulo, 13380 011, Brazil.
Anibal Eugênio Vercesi FilhoInstituto de Zootecnia, Rua Heitor Penteado, n. 56, Nova Odessa, São Paulo, 13380 011, Brazil.
Márcia Cristina de Sena OliveiraEmbrapa Pecuária Sudeste, São Carlos, São Paulo, 13560‑970, Brazil.
Cintia Hiromi OkinoEmbrapa Pecuária Sudeste, São Carlos, São Paulo, 13560‑970, Brazil. cintia.okino@embrapa.br.ORCID http://orcid.org/0000-0002-3692-3902
Institute of Animal Science and Pastures · BRBrazilian Agricultural Research Corporation · BRUniversidade Estadual Paulista (Unesp) · BR

Funding

fundação de amparo à pesquisa do estado de são paulo 2016/07216-7fundação de amparo à pesquisa do estado de são paulo 2019/22675-6
6 · The paper itself

Abstract

backgroundHigh quality and quantity of messenger RNA (mRNA) are required for accuracy of gene expression studies and other RNA-based downstream applications. Since RNA is considered a labile macromolecular prone to degradation, which may result in falsely altered gene expression patterns, several commercial stabilizing reagents have been developed aiming to keep RNA stable for long period. However, for studies involving large number of experimental samples, the high costs related to these specific reagents may constitute a barrier. METHODS AND

resultsIn this context the present study was designed aiming to evaluate the stability of mRNA in whole bovine blood collected in EDTA tubes during storage at common fridge (4 °C). Whole blood samples were collected from six Holstein calves and submitted to RNA extraction in each different interval: immediately after blood sampling (< 2 h), at 1-day post-sampling (dps), 2 dps, 3 dps, 7 dps and 14dps intervals. RNA integrity and purity were evaluated, and RT-qPCR assays were run using seven different genes (B2M, ACTB, PPIA, GAPDH, YWHAZ, CD4 and IFN-γ) aiming to evaluate the presence of altered gene transcription during storage. All extracted RNA samples presented high purity, while optimal integrity and unaltered gene expression were observed in whole experimental group up to 3 days of storage.

conclusionBovine blood RNA remained stable in K3EDTA tubes for 3 days stored at common fridge and can be successfully and accurately used for gene expression studies.

Indexed as

RNA StabilityAnimalsBlood Specimen CollectionCattleCold TemperatureGene Expression ProfilingGene Expression RegulationReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTime FactorsTranscriptomeRNA, MessengerCattleFridgeGene expressionRNA integrityStabilityStorage

Identifiers

PMID34655019
OpenAlexW3196871716

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.