Evidence map›Paper›PMID 34654899›Full record

ArticleScientific reports2021

The inheritance of anthracnose (Colletotrichum sublineola) resistance in sorghum differential lines QL3 and IS18760.

Hugo E Cuevas, Clara M Cruet-Burgos, Louis K Prom, Joseph E Knoll, Lauren R Stutts, Wilfred Vermerris

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Pathotype determination of sorghum anthracnose (Frontiers in microbiology · 2024
    Article
  2. Genetic Diversity and Classification ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  3. Review
  4. The Effects of Epicuticular Wax on Anthracnose Resistance ofInternational journal of molecular sciences · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Hugo E CuevasUSDA-Agricultural Research Service-Tropical Agriculture Research Station, Mayagüez, Puerto Rico. hugo.cuevas@usda.gov.
Clara M Cruet-BurgosUSDA-Agricultural Research Service-Tropical Agriculture Research Station, Mayagüez, Puerto Rico.
Louis K PromUSDA-Agricultural Research Service-Southern Plains Agriculture Research Center, College Station, TX, USA.
Joseph E KnollUSDA-Agricultural Research Service, Crop Genetics and Breeding Research, Tifton, GA, USA.
Lauren R StuttsGraduate Program in Plant Molecular and Cellular Biology, University of Florida, Gainesville, FL, USA.
Wilfred VermerrisDepartment of Microbiology and Cell Science, UF Genetics Institute, and Florida Center for Renewable Fuels and Chemicals, University of Florida, Gainesville, FL, USA.
United States Department of Agriculture · USUniversity of Florida · USAgricultural Research Service · USSouthern Plains Agricultural Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthracnose caused by the fungal pathogen C. sublineola is an economically important constraint on worldwide sorghum production. The most effective strategy to safeguard yield is through the introgression of resistance alleles. This requires elucidation of the genetic basis of the different resistance sources that have been identified. In this study, 223 recombinant inbred lines (RILs) derived from crossing anthracnose-differentials QL3 (96 RILs) and IS18760 (127 RILs) with the common susceptible parent PI609251 were evaluated at four field locations in the United States (Florida, Georgia, Texas, and Puerto Rico) for their anthracnose resistance response. Both RIL populations were highly susceptible to anthracnose in Florida and Georgia, while in Puerto Rico and Texas they were segregating for anthracnose resistance response. A genome scan using a composite linkage map of 982 single nucleotide polymorphisms (SNPs) detected two genomic regions of 4.31 and 0.85 Mb on chromosomes 4 and 8, respectively, that explained 10-27% of the phenotypic variation in Texas and Puerto Rico. In parallel, a subset of 43 RILs that contained 67% of the recombination events were evaluated against anthracnose pathotypes from Arkansas (2), Puerto Rico (2) and Texas (4) in the greenhouse. A genome scan showed that the 7.57 Mb region at the distal end of the short arm of chromosome 5 is associated with the resistance response against the pathotype AMP-048 from Arkansas. Comparative analysis identified the genomic region on chromosome 4 overlaps with an anthracnose resistance locus identified in another anthracnose-differential line, SC414-12E, indicating this genomic region is of interest for introgression in susceptible sorghum germplasm. Candidate gene analysis for the resistance locus on chromosome 5 identified an R-gene cluster that has high similarity to another R-gene cluster associated with anthracnose resistance on chromosome 9.

Indexed as

Quantitative Trait LociColletotrichumDisease ResistanceHost-Pathogen InteractionsPlant DiseasesSorghumSpecies Specificity

Identifiers

PMID34654899
PMCPMC8519964
OpenAlexW3207168418

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.