Evidence map›Paper›PMID 34654689›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2021

Maternal and Infant Immune Repertoire Sequencing Analysis Identifies Distinct Ig and TCR Development in Term and Preterm Infants.

Brian L Le, Renan Sper, Sandra C A Nielsen, Silvia Pineda, Quoc-Hung Nguyen, Ji-Yeun Lee, Scott D Boyd, Tippi C MacKenzie, Marina Sirota

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Brian L LeBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA.
Renan SperDepartment of Surgery, University of California, San Francisco, San Francisco, CA.ORCID 0000-0003-0949-2163
Sandra C A NielsenDepartment of Pathology, Stanford University, Stanford, CA; and.ORCID 0000-0003-4746-8287
Silvia PinedaBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA.
Quoc-Hung NguyenDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Ji-Yeun LeeDepartment of Pathology, Stanford University, Stanford, CA; and.
Scott D BoydDepartment of Pathology, Stanford University, Stanford, CA; and.
Tippi C MacKenzieDepartment of Surgery, University of California, San Francisco, San Francisco, CA.
Marina SirotaBakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA; marina.sirota@ucsf.edu.
University of California, San Francisco · USStanford University · US

Funding

T cell activation and the breakdown of maternal-fetal tolerance in preterm laborR01AI116880 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MACKENZIE, TIPPI · 2015 to 2019
$2.0M
NIAID NIH HHS R01 AI116880
6 · The paper itself

Abstract

Preterm labor (PTL) is the leading cause of neonatal morbidity and mortality worldwide. Whereas many studies have investigated the maternal immune responses that cause PTL, fetal immune cell activation has recently been raised as an important contributor to the pathogenesis of PTL. In this study, we analyzed lymphocyte receptor repertoires in maternal and cord blood from 14 term and 10 preterm deliveries, hypothesizing that the high prevalence of infection in patients with PTL may result in specific changes in the T cell and B cell repertoires. We analyzed TCR β-chain (TCR-β) and IgH diversity, CDR3 lengths, clonal sharing, and preferential usage of variable and joining gene segments. Both TCR-β and IgH repertoires had shorter CDR3s compared with those in maternal blood. In cord blood samples, we found that CDR3 lengths correlated with gestational age, with shorter CDR3s in preterm neonates suggesting a less developed repertoire. Preterm cord blood displayed preferential usage of a number of genes. In preterm pregnancies, we observed significantly higher prevalence of convergent clones between mother/baby pairs than in term pregnancies. Together, our results suggest the repertoire of preterm infants displays a combination of immature features and convergence with maternal TCR-β clones compared with that of term infants. The higher clonal convergence in PTL could represent mother and fetus both responding to a shared stimulus like an infection. These data provide a detailed analysis of the maternal-fetal immune repertoire in term and preterm patients and contribute to a better understanding of neonate immune repertoire development and potential changes associated with PTL.

Indexed as

Complementarity Determining RegionsFemaleHumansImmunoglobulin Heavy ChainsInfant, NewbornInfant, PrematureObstetric Labor, PrematurePregnancyPremature BirthReceptors, Antigen, T-CellComplementarity Determining RegionsImmunoglobulin Heavy ChainsReceptors, Antigen, T-Cell

Identifiers

PMID34654689
PMCPMC8578401
OpenAlexW3207810039

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.