Evidence map›Paper›PMID 34654373›Full record

ArticleBMC plant biology2021

Genome-wide survey of Gγ subunit gene family in eight Rosaceae and expression analysis of PbrGGs in pear (Pyrus bretschneideri).

Guodong Chen, Yang Li, Xin Qiao, Weike Duan, Cong Jin, Rui Cheng, Jizhong Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Guodong ChenCollege of Life Science and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China. chenguodong@hyit.edu.cn.
Yang LiCollege of Life Science and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China.
Xin QiaoCenter of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Weike DuanCollege of Life Science and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China.
Cong JinCollege of Life Science and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China.
Rui ChengHuai'an Key Laboratory for Facility Vegetables, Huaiyin Institute of Agricultural Sciences of Xuhuai Region of Jiangsu, Huai'an, 223001, China.
Jizhong WangCollege of Life Science and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China.
Huaiyin Institute of Technology · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHeterotrimeric G-proteins, composed of Gα, Gβ and Gγ subunits, are important signal transmitters, mediating the cellular response to multiple stimuli in animals and plants. The Gγ subunit is an essential component of the G-protein, providing appropriate functional specificity to the heterotrimer complex and has been well studied in many species. However, the evolutionary history, expression pattern and functional characteristics of Gγ subunits has not been explored in the Rosaceae, representing many important fruit crops.

resultsIn this study, 35 Gγ subunit genes were identified from the eight species belonging to the Rosaceae family. Based on the structural gene characteristics, conserved protein motifs and phylogenetic analysis of the Gγ subunit genes, the genes were classified into three clades. Purifying selection was shown to play an important role in the evolution of Gγ subunit genes, while a recent whole-genome duplication event was the principal force determining the expansion of the Gγ subunit gene family in the subfamily Maloideae. Gγ subunit genes exhibited diverse spatiotemporal expression patterns in Chinese white pear, including fruit, root, ovary and bud, and under abiotic stress conditions, the relative expression of Gγ subunit genes were up-regulated or down-regulated. In addition, seven of the Gγ subunit proteins in pear were located on the plasma membrane, in the cytoplasm or nucleus.

conclusionOverall, this study of the Gγ subunit gene family in eight Rosaceae species provided useful information to better understand the evolution and expression of these genes and facilitated further exploration of their functions in these important crop plants.

Indexed as

Amino Acid MotifsEvolution, MolecularGene Expression ProfilingGenome, PlantGTP-Binding Protein gamma SubunitsMultigene FamilyPhylogenyPlant ProteinsPyrusRosaceaeSignal TransductionStress, PhysiologicalGTP-Binding Protein gamma SubunitsPlant ProteinsAbiotic stressExpression patternGγ subunitPearSubcellular localization

Identifiers

PMID34654373
PMCPMC8518290
OpenAlexW3206146168

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.