Evidence map›Paper›PMID 34653274›Full record

ArticleMedical physics2021

Assessment of fully automatic segmentation of pulmonary artery and aorta on noncontrast CT with optimal surface graph cuts.

Zahra Sedghi Gamechi, Andres M Arias-Lorza, Zaigham Saghir, Daniel Bos, Marleen de Bruijne

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Article in Medical physics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

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3 · Its place in the literature

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3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Zahra Sedghi GamechiDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Andres M Arias-LorzaDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Zaigham SaghirDepartment of Respiratory Medicine, Gentofte University Hospital, Hellerup, Denmark.
Daniel BosDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Marleen de BruijneDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, The Netherlands.
Erasmus MC · NLErasmus University Rotterdam · NLGentofte Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAccurate segmentation of the pulmonary arteries and aorta is important due to the association of the diameter and the shape of these vessels with several cardiovascular diseases and with the risk of exacerbations and death in patients with chronic obstructive pulmonary disease. We propose a fully automatic method based on an optimal surface graph-cut algorithm to quantify the full 3D shape and the diameters of the pulmonary arteries and aorta in noncontrast computed tomography (CT) scans.

methodsThe proposed algorithm first extracts seed points in the right and left pulmonary arteries, the pulmonary trunk, and the ascending and descending aorta by using multi-atlas registration. Subsequently, the centerlines of the pulmonary arteries and aorta are extracted by a minimum cost path tracking between the extracted seed points, with a cost based on a combination of lumen intensity similarity and multiscale medialness in three planes. The centerlines are refined by applying the path tracking algorithm to curved multiplanar reformatted scans and are then smoothed and dilated nonuniformly according to the extracted local vessel radius from the medialness filter. The resulting coarse estimates of the vessels are used as initialization for a graph-cut segmentation. Once the vessels are segmented, the diameters of the pulmonary artery (PA) and the ascending aorta (AA) and the

resultsWe obtained a Dice segmentation overlap of 0.94 ± 0.02 for pulmonary arteries and 0.96 ± 0.01 for the aorta, with a mean surface distance of 0.62 ± 0.33 mm and 0.43 ± 0.07 mm, respectively. ICC between manual and automatic in-slice diameter measures was 0.92 for PA, 0.97 for AA, and 0.90 for the

conclusionThe proposed automatic segmentation method can reliably extract diameters of the large arteries in non-ECG-gated noncontrast CT scans such as are acquired in lung cancer screening.

Indexed as

Lung NeoplasmsPulmonary ArteryAlgorithmsAortaEarly Detection of CancerHumansTomography, X-Ray ComputedaortaCTgraph cutpulmonary arterysegmentation

Identifiers

PMID34653274
PMCPMC9298252
OpenAlexW3207667581

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.