Evidence map›Paper›PMID 34652894›Full record

ArticleACS chemical biology2021

New Orange Ligand-Dependent Fluorescent Reporter for Anaerobic Imaging.

Hannah E Chia, Karl J Koebke, Aathmaja A Rangarajan, Nicole M Koropatkin, E Neil G Marsh, Julie S Biteen

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Microbial single-cell applications under anoxic conditions.Applied and environmental microbiology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. A fluorescent reporter system for anaerobic thermophiles.Frontiers in bioengineering and biotechnology · 2023
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hannah E ChiaProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Karl J KoebkeDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0003-2198-2667
Aathmaja A RangarajanDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.
Nicole M KoropatkinDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan 48109, United States.
E Neil G MarshProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0003-1713-1683
Julie S BiteenProgram in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0003-2038-6484
University of Michigan · US

Funding

Understanding hydrogen atom transfer reactions in enzymesR01GM093088 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARSH, E NEIL · 2010 to 2023
$3.5M
NIGMS NIH HHS R01 GM093088
6 · The paper itself

Abstract

Bilin-binding fluorescent proteins like UnaG-bilirubin are noncovalent ligand-dependent reporters for oxygen-free microscopy but are restricted to blue and far-red fluorescence. Here we describe a high-throughput screening approach to provide a new UnaG-ligand pair that can be excited in the 532 nm green excitation microscopy channel. We identified a novel orange UnaG-ligand pair that maximally emits at 581 nm. Whereas the benzothiazole-based ligand itself is nominally fluorescent, the compound binds UnaG with high affinity (

Indexed as

Bacteroides thetaiotaomicronBenzothiazolesEscherichia coliFluorescent DyesGreen Fluorescent ProteinsHigh-Throughput Screening AssaysLigandsMicroscopy, FluorescenceProtein BindingBenzothiazolesFluorescent DyesGreen Fluorescent ProteinsLigands

Identifiers

PMID34652894
PMCPMC11180495
OpenAlexW3206773774

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.