Evidence map›Paper›PMID 34648357›Full record

ArticleScience translational medicine2021

Lung epithelial and endothelial damage, loss of tissue repair, inhibition of fibrinolysis, and cellular senescence in fatal COVID-19.

Felice D'Agnillo, Kathie-Anne Walters, Yongli Xiao, Zong-Mei Sheng, Kelsey Scherler, Jaekeun Park, Sebastian Gygli, Luz Angela Rosas, Kaitlyn Sadtler, Heather Kalish and 18 more

Open access · greenAbstract read
In one paragraph

Article in Science translational medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 244 citations in OpenAlex.

  1. Trial
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  4. SARS-CoV-2 drives upregulation of EpCAM in respiratory epithelial cells with hypercellular profile during severe COVID-19.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
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  16. RBMX2 linkseLife · 2025
    Article
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  19. Article
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95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 12 institutions in 1 country.

Felice D'AgnilloLaboratory of Biochemistry and Vascular Biology, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, MD, USA.ORCID 0000-0002-4134-9490
Kathie-Anne WaltersInstitute for Systems Biology, Seattle, WA, USA.
Yongli XiaoViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Zong-Mei ShengViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Kelsey ScherlerInstitute for Systems Biology, Seattle, WA, USA.ORCID 0000-0001-5955-5391
Jaekeun ParkViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-4506-8127
Sebastian GygliViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Luz Angela RosasViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-8743-7189
Kaitlyn SadtlerSection on Immunoengineering, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0003-2587-8330
Heather KalishBioengineering and Physical Sciences Shared Resource, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-4848-2067
Charles A BlattiNational Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID 0000-0002-4683-6271
Ruoqing ZhuDepartment of Statistics, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID 0000-0002-0753-5716
Lisa GatzkeNational Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID 0000-0003-3533-0010
Colleen BushellNational Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID 0000-0002-5268-1915
Matthew J MemoliClinical Studies Unit, Laboratory of Infectious Diseases, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-6393-5178
Steven J O'DaySaint John's Cancer Institute, Santa Monica, CA, USA.
Trevan D FischerSaint John's Cancer Institute, Santa Monica, CA, USA.ORCID 0000-0002-1522-7924
Terese C HammondSaint John's Cancer Institute, Santa Monica, CA, USA.
Raymond C LeeDivision of Cardiothoracic Surgery, USC Keck School of Medicine, Los Angeles, CA, USA.
J Christian CashDivision of Cardiothoracic Surgery, USC Keck School of Medicine, Los Angeles, CA, USA.
Matthew E PowersDivision of Cardiothoracic Surgery, USC Keck School of Medicine, Los Angeles, CA, USA.ORCID 0000-0001-9059-8429
Grant E O'KeefeDepartment of Surgery, University of Washington, Harborview Medical Center, Seattle, WA, USA.ORCID 0000-0001-7453-9429
Kelly J ButnorDepartment of Pathology and Laboratory Medicine, University of Vermont Medical Center, Burlington, VT, USA.
Amy V RapkiewiczDepartment of Pathology, New York University Long Island School of Medicine, Mineola, NY, USA.ORCID 0000-0002-3438-022X
William D TravisDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Scott P LayneSaint John's Cancer Institute, Santa Monica, CA, USA.ORCID 0000-0002-7681-2713
John C KashViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-8037-7101
Jeffery K TaubenbergerViral Pathogenesis and Evolution Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-9694-7228
National Institutes of Health · USSaint John's Health Center · USUniversity of Illinois Urbana-Champaign · USKeck Hospital of USC · USInstitute for Systems Biology · USNational Institute of Biomedical Imaging and Bioengineering · USCenter for Biologics Evaluation and Research · USLong Island University · USMemorial Sloan Kettering Cancer Center · USNational Institute of Allergy and Infectious Diseases · USUniversity of Vermont Medical Center · USUniversity of Washington · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
SARS-CoV-2 PathogenesisZIAAI001271 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI TAUBENBERGER, JEFFERY · 2020 to 2025
$3.1M
Intramural NIH HHS ZIA AI001271NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is characterized by respiratory distress, multiorgan dysfunction, and, in some cases, death. The pathological mechanisms underlying COVID-19 respiratory distress and the interplay with aggravating risk factors have not been fully defined. Lung autopsy samples from 18 patients with fatal COVID-19, with symptom onset-to-death times ranging from 3 to 47 days, and antemortem plasma samples from 6 of these cases were evaluated using deep sequencing of SARS-CoV-2 RNA, multiplex plasma protein measurements, and pulmonary gene expression and imaging analyses. Prominent histopathological features in this case series included progressive diffuse alveolar damage with excessive thrombosis and late-onset pulmonary tissue and vascular remodeling. Acute damage at the alveolar-capillary barrier was characterized by the loss of surfactant protein expression with injury to alveolar epithelial cells, endothelial cells, respiratory epithelial basal cells, and defective tissue repair processes. Other key findings included impaired clot fibrinolysis with increased concentrations of plasma and lung plasminogen activator inhibitor-1 and modulation of cellular senescence markers, including p21 and sirtuin-1, in both lung epithelial and endothelial cells. Together, these findings further define the molecular pathological features underlying the pulmonary response to SARS-CoV-2 infection and provide important insights into signaling pathways that may be amenable to therapeutic intervention.

Indexed as

COVID-19Cellular SenescenceFibrinolysisHumansLungSARS-CoV-2

Identifiers

PMID34648357
PMCPMC11000440
OpenAlexW3205438960

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.