Evidence map›Paper›PMID 34647232›Full record

ArticlePharmaceutical research2021

The Effect of Single Nucleotide Variations in the Transmembrane Domain of OATP1B1 on in vitro Functionality.

Wilma Kiander, Kati-Sisko Vellonen, Melina M Malinen, Mikko Gynther, Marja Hagström, Madhushree Bhattacharya, Seppo Auriola, Jan B Koenderink, Heidi Kidron

Open access · hybridAbstract read
In one paragraph

Article in Pharmaceutical research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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  7. Functional Characterization of SixMolecular pharmaceutics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Wilma KianderDivision of Pharmaceutical Biosciences, Faculty of Pharmacy, University of Helsinki, Viikinkaari 5E, 00014, Helsinki, Finland.
Kati-Sisko VellonenSchool of Pharmacy, University of Eastern Finland, Kuopio, Finland.
Melina M MalinenSchool of Pharmacy, University of Eastern Finland, Kuopio, Finland.
Mikko GyntherSchool of Pharmacy, University of Eastern Finland, Kuopio, Finland.
Marja HagströmDivision of Pharmaceutical Biosciences, Faculty of Pharmacy, University of Helsinki, Viikinkaari 5E, 00014, Helsinki, Finland.
Madhushree BhattacharyaDivision of Pharmaceutical Biosciences, Faculty of Pharmacy, University of Helsinki, Viikinkaari 5E, 00014, Helsinki, Finland.
Seppo AuriolaSchool of Pharmacy, University of Eastern Finland, Kuopio, Finland.
Jan B KoenderinkDepartment of Pharmacology and Toxicology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, the Netherlands.
Heidi KidronDivision of Pharmaceutical Biosciences, Faculty of Pharmacy, University of Helsinki, Viikinkaari 5E, 00014, Helsinki, Finland. heidi.kidron@helsinki.fi.ORCID http://orcid.org/0000-0001-6427-8042
University of Eastern Finland · FIUniversity of Helsinki · FIRadboud University Nijmegen · NL

Funding

h2020 marie skłodowska-curie actions 799510
6 · The paper itself

Abstract

purposeOrganic Anion Transporting Polypeptide 1B1 (OATP1B1) mediates hepatic influx and clearance of many drugs, including statins. The SLCO1B1 gene is highly polymorphic and its function-impairing variants can predispose patients to adverse effects. The effects of rare genetic variants of SLCO1B1 are mainly unexplored. We examined the impact of eight naturally occurring rare variants and the well-known SLCO1B1 c.521C > T (V174A) variant on in vitro transport activity, cellular localization and abundance.

methodsTransport of rosuvastatin and 2,7-dichlorofluorescein (DCF) in OATP1B1 expressing HEK293 cells was measured to assess changes in activity of the variants. Immunofluorescence and confocal microscopy determined the cellular localization of OATP1B1 and LC-MS/MS based quantitative targeted absolute proteomics analysis quantified the amount of OATP1B1 in crude membrane fractions.

resultsAll studied variants, with the exception of P336R, reduced protein abundance to varying degree. V174A reduced protein abundance the most, over 90% compared to wild type. Transport function was lost in G76E, V174A, L193R and R580Q variants. R181C decreased activity significantly, while T345M and L543W retained most of wild type OATP1B1 activity. P336R showed increased activity and H575L decreased the transport of DCF significantly, but not of rosuvastatin. Decreased activity was interrelated with lower absolute protein abundance in the studied variants.

conclusionsTransmembrane helices 2, 4 and 11 appear to be crucial for proper membrane localization and function of OATP1B1. Four of the studied variants were identified as loss-of-function variants and as such could make the individual harboring these variants susceptible to altered pharmacokinetics and adverse effects of substrate drugs.

Indexed as

Biological TransportDrug InteractionsGene ExpressionHEK293 CellsHumansHydroxymethylglutaryl-CoA Reductase InhibitorsIsoquinolinesLiverLiver-Specific Organic Anion Transporter 1MutationNucleotidesPolymorphism, GeneticRosuvastatin CalciumTandem Mass Spectrometry2,7-dideoxypancratistatinHydroxymethylglutaryl-CoA Reductase InhibitorsIsoquinolinesLiver-Specific Organic Anion Transporter 1NucleotidesRosuvastatin CalciumSLCO1B1 protein, human

Identifiers

PMID34647232
PMCPMC8602229
OpenAlexW3206846674

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.