Evidence map›Paper›PMID 34645403›Full record

ArticleBMC plant biology2021

SWATH-MS based quantitive proteomics reveal regulatory metabolism and networks of androdioecy breeding system in Osmanthus fragrans.

Yi-Fan Duan, Cheng Zhang, Min Zhang, Yu Ye, Kai-Lu Zhang, Mo-Xian Chen, Lin Chen, Xian-Rong Wang, Fu-Yuan Zhu

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yi-Fan Duan *College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Cheng Zhang *College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Min Zhang *College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Yu Ye *College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Kai-Lu ZhangCollege of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Mo-Xian ChenCollege of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Lin ChenCollege of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China.
Xian-Rong WangCollege of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China. wangxianrong66@njfu.edu.cn.
Fu-Yuan ZhuCollege of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing, 210037, China. fyzhu@njfu.edu.cn.
Nanjing Forestry University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe fragrant flower plant Osmanthus fragrans has an extremely rare androdioecious breeding system displaying the occurrence of males and hermaphrodites in a single population, which occupies a crucial intermediate stage in the evolutionary transition between hermaphroditism and dioecy. However, the molecular mechanism of androdioecy plant is very limited and still largely unknown.

resultsHere, we used SWATH-MS-based quantitative approach to study the proteome changes between male and hermaphroditic O. fragrans pistils. A total of 428 proteins of diverse functions were determined to show significant abundance changes including 210 up-regulated and 218 down-regulated proteins in male compared to hermaphroditic pistils. Functional categorization revealed that the differentially expressed proteins (DEPs) primarily distributed in the carbohydrate metabolism, secondary metabolism as well as signaling cascades. Further experimental analysis showed the substantial carbohydrates accumulation associated with promoted net photosynthetic rate and water use efficiency were observed in purplish red pedicel of hermaphroditic flower compared with green pedicel of male flower, implicating glucose metabolism serves as nutritional modulator for the differentiation of male and hermaphroditic flower. Meanwhile, the entire upregulation of secondary metabolism including flavonoids, isoprenoids and lignins seem to protect and maintain the male function in male flowers, well explaining important feature of androdioecy that aborted pistil of a male flower still has a male function. Furthermore, nine selected DEPs were validated via gene expression analysis, suggesting an extra layer of post-transcriptional regulation occurs during O. fragrans floral development.

conclusionTaken together, our findings represent the first SWATH-MS-based proteomic report in androdioecy plant O. fragrans, which reveal carbohydrate metabolism, secondary metabolism and post-transcriptional regulation contributing to the androdioecy breeding system and ultimately extend our understanding on genetic basis as well as the industrialization development of O. fragrans.

Indexed as

Biological EvolutionCarbohydrate MetabolismChinaFlowersGene Expression Regulation, PlantGenetic VariationHermaphroditic OrganismsOleaceaePhenotypeProteomicsReproductionandrodioecyOsmanthus fragransPistilProteomicsSWATH-MS

Identifiers

PMID34645403
PMCPMC8513349
OpenAlexW3206902604

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.