Evidence map›Paper›PMID 34643920›Full record

ArticleMolecular biology reports2021

Genetic predisposition of SNPs in miRNA-149 (rs2292832) and FOXE1 (rs3758249) in thyroid Cancer.

Rashida Khan, Humaira Shaheen, Qaisar Mansoor, Samina Asghar Abbasi, Shazia Fatima, Ayesha Ammar, Ruqia Mehmood Baig

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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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  5. Analysis of Rare Alleles ofDiagnostics (Basel, Switzerland) · 2022
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4 · The record

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5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Rashida KhanDepartment of Zoology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan.ORCID http://orcid.org/0000-0002-6360-6072
Humaira ShaheenDepartment of Zoology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan.
Qaisar MansoorInstitute of Biomedical and Genetic Engineering (IBGE), Islamabad, Pakistan.
Samina Asghar AbbasiDepartment of Zoology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan.
Shazia FatimaNuclear Medicine, Oncology and Radiotherapy Institute (NORI), Islamabad, Pakistan.
Ayesha AmmarNuclear Medicine, Oncology and Radiotherapy Institute (NORI), Islamabad, Pakistan.
Ruqia Mehmood BaigDepartment of Zoology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan. dr.ruqia@uaar.edu.pk.ORCID http://orcid.org/0000-0002-5605-7191
Pir Mehr Ali Shah Arid Agriculture University · PKKarachi Institute of Radiotherapy and Nuclear Medicine · PKInstitute of Biomedical and Genetic Engineering · PK

Funding

higher education commision, pakistan 10168
6 · The paper itself

Abstract

backgroundMany efforts have been made in recent years to investigate the alterations in protein-coding genes as well as non-coding RNAs that are playing an emerging role in the development and progression of cancers. These miRNAs are short non-coding functional RNAs that are involved in the regulation of transcriptome. In different studies, it was found that human miRNA-149 is an important microRNA that is functioning either as onco-miRNAs or acting as tumor suppressors, in different conditions. RATIONALE: Many of the miRNAs are regulating different SNPs of FOXE1 in different studies which are causing low-to-moderate penetrance of genes that initiates the development of thyroid cancer. The involvement of SNPs in miRNA-149 gene rs2292832 and FOXE1 rs3758249 with PTC for better disease prognosis and management was determined in this study and the relation between these SNPs at the genotypic level was also evaluated. MATERIALS AND 

methodsPTC patients with age and gender-matched controls were recruited in the present study. Blood samples were collected in EDTA vacutainer followed by DNA extraction by the organic method. Genotyping of rs2292832 and rs3758249 was done by ARMS-PCR and PCR- RFLP respectively. Statistical analyses were carried out by using SPSS software (version 20).

resultsThe mutation T>C in miRNA-149 rs2292832 was significantly associated with thyroid cancer (p-value 0.0004, < 0.05) while rs3758249 G>C did not show significant association with the disease (p-value 0.124244, > 0.05). Moreover, no correlation of rs2292832 at the genotype level was observed with rs3758249.

conclusionsmiRNA-149 gene SNP rs2292832 was observed in strong association with thyroid cancer. Lack of genetic association of rs3758249 of FOXE1 gene has been ruled for the disease. The statistically significant association of rs2292832 with thyroid cancer depicts its mechanistic involvement at the cellular level in Papillary Thyroid Carcinoma.

Indexed as

AdultAgedAllelesCarcinoma, PapillaryCase-Control StudiesFemaleForkhead Transcription FactorsGenetic Predisposition to DiseaseGenotypeHumansMaleMicroRNAsMiddle AgedPakistanPolymorphism, Single NucleotideThyroid Cancer, PapillaryForkhead Transcription FactorsFOXE1 protein, humanMicroRNAsMIRN149 microRNA, humanFOXE1miRNA-149Papillary thyroid carcinomars2292832rs3758249Thyroid cancer

Identifiers

PMID34643920
OpenAlexW3206092554

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