Evidence map›Paper›PMID 34643790›Full record

ArticleHuman genetics2021

The population genetics characteristics of a 90 locus panel of microhaplotypes.

Andrew J Pakstis, Neeru Gandotra, William C Speed, Michael Murtha, Curt Scharfe, Kenneth K Kidd

Abstract read
In one paragraph

Article in Human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andrew J Pakstis *Department of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA.
Neeru Gandotra *Department of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA.
William C SpeedDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA.
Michael MurthaDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA.
Curt ScharfeDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA.
Kenneth K KiddDepartment of Genetics, Yale University School of Medicine, New Haven, CT, 06520, USA. Kenneth.Kidd@yale.edu.

Funding

Multiplex gene sequencing and metabolomics analysis from newborn dried blood spots to improve screening and diagnosis of metabolic disorders.R01HD102537 · NICHD · YALE UNIVERSITY · PI SCHARFE, CURT · 2020 to 2024
$3.0M
national institute of justice, office of justice programs of the u.s. department of justice 2018-75-CX-0041NICHD NIH HHS R01 HD102537
6 · The paper itself

Abstract

Single-nucleotide polymorphisms (SNPs) and small genomic regions with multiple SNPs (microhaplotypes, MHs) are rapidly emerging as novel forensic investigative tools to assist in individual identification, kinship analyses, ancestry inference, and deconvolution of DNA mixtures. Here, we analyzed information for 90 microhaplotype loci in 4009 individuals from 79 world populations in 6 major biogeographic regions. The study included multiplex microhaplotype sequencing (mMHseq) data analyzed for 524 individuals from 16 populations and genotype data for 3485 individuals from 63 populations curated from public repositories. Analyses of the 79 populations revealed excellent characteristics for this 90-plex MH panel for various forensic applications achieving an overall average effective number of allele values (A

Indexed as

Forensic GeneticsHaplotypesPolymorphism, Single NucleotideGenetic MarkersGenetics, PopulationHumansSequence Analysis, DNAGenetic Markers

Identifiers

PMID34643790
PMCPMC8553733

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.