Evidence map›Paper›PMID 34643448›Full record

ArticleMicrobiology spectrum2021

Oral Microbiome Alterations and SARS-CoV-2 Saliva Viral Load in Patients with COVID-19.

Emily Happy Miller, Medini K Annavajhala, Alexander M Chong, Heekuk Park, Yael R Nobel, Ali Soroush, John W Blackett, Anna Krigel, Meaghan M Phipps, Daniel E Freedberg and 4 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Review
  7. The Impact of Aging Oral Health on Long COVID-19.Journal of dental research · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Emily Happy Miller *Department of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Medini K Annavajhala *Department of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Alexander M ChongDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Heekuk ParkDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Yael R NobelDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Ali SoroushDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
John W BlackettDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Anna KrigelDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Meaghan M PhippsDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Daniel E FreedbergDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Jason ZuckerDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Ellen D SanoDepartment of Emergency Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Anne-Catrin UhlemannDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.
Julian A AbramsDepartment of Medicine, Columbia University Irving Medical Center, New York, New York, USA.ORCID 0000-0002-6021-9376
Columbia University Irving Medical Center · US

Funding

NRSA Training CoreTL1TR001875 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SPANN, MARISA N, TAYLOR, JACQUELYN Y · 2016 to 2025
$8.9M
The Oral Microbiome for the Detection of Barretts EsophagusR01CA238433 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABRAMS, JULIAN · 2019 to 2023
$2.6M
The role of the microbiome in HPV-associated cervical cancer in women with HIVR01CA245894 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI UHLEMANN, ANNE-CATRIN · 2020 to 2024
$2.3M
Columbia Integrated Training Program in Infectious Diseases ResearchT32AI100852 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MAGDALENA ELZBIETA SOBIESZCZYK, Anne-Catrin Uhlemann · 2013 to 2026
$2.2M
NCATS NIH HHS TL1 TR001875NCI NIH HHS R01 CA238433NCI NIH HHS R01 CA245894NIAID NIH HHS T32 AI100852
6 · The paper itself

Abstract

Bacterial-viral interactions in saliva have been associated with morbidity and mortality for respiratory viruses such as influenza and SARS-CoV. However, such transkingdom relationships during SARS-CoV-2 infection are currently unknown. Here, we aimed to elucidate the relationship between saliva microbiota and SARS-CoV-2 in a cohort of newly hospitalized COVID-19 patients and controls. We used 16S rRNA sequencing to compare microbiome diversity and taxonomic composition between COVID-19 patients (

Indexed as

BacteriaCOVID-19DysbiosisFemaleHumansMaleMicrobial InteractionsMicrobiotaMiddle AgedNasopharynxRNA, Ribosomal, 16SSalivaSARS-CoV-2Viral LoadRNA, Ribosomal, 16SCOVID-19saliva microbiomeSARS-CoV-2viral load

Identifiers

PMID34643448
PMCPMC8515944
OpenAlexW3206652880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.