Evidence map›Paper›PMID 34643091›Full record

ArticlePhysiological genomics2021

Comparative impact of dietary carbohydrates on the liver transcriptome in two strains of mice.

Yuling Chi, Dou Yeon Youn, Alus M Xiaoli, Li Liu, Yunping Qiu, Irwin J Kurland, Jacob B Pessin, Fajun Yang, Jeffrey E Pessin

Open access · greenAbstract readComparative Study
In one paragraph

Article in Physiological genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 80% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Widespread discordance between mRNA expression, protein abundance andbioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yuling ChiDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.ORCID 0000-0003-0601-1934
Dou Yeon YounDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Alus M XiaoliDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Li LiuDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Yunping QiuEinstein Stable Isotope and Metabolomics Core, Albert Einstein College of Medicine, Bronx, New York.
Irwin J KurlandDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Jacob B PessinDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Fajun YangDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Jeffrey E PessinDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York.
Albert Einstein College of Medicine · US

Funding

Coordinating and Bioinformatics Unit for the MMPC/DiaCompU24DK076169 · NIDDK · AUGUSTA UNIVERSITY · PI MCINDOE, RICHARD A. · 2006 to 2018
$42.4M
Stable Isotope and Metabolomics CoreP60DK020541 · NIDDK · YESHIVA UNIVERSITY · PI PESSIN, JEFFREY E. · 1986 to 2014
$29.8M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI JEFFREY E. PESSIN · 2015 to 2026
$27.7M
The Mediator complex in the coordinate regulation of lipogenic gene expressionR01DK110063 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI ELISCOVICH, CAROLINA INES, PESSIN, JEFFREY E. · 2016 to 2025
$5.9M
Regulation of Brown Fat Development and Function by Cyclin CR01DK098439 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI PESSIN, JEFFREY E., YANG, FAJUN JAMES · 2013 to 2021
$3.8M
Novel effectors of insulin action in the liverR01DK117417 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI YANG, FAJUN JAMES · 2020 to 2023
$2.1M
NIDDK NIH HHS P30 DK020541NIDDK NIH HHS P60 DK020541NIDDK NIH HHS R01 DK098439NIDDK NIH HHS R01 DK110063NIDDK NIH HHS R01 DK117417NIDDK NIH HHS U24 DK076169
6 · The paper itself

Abstract

Excessive long-term consumption of dietary carbohydrates, including glucose, sucrose, or fructose, has been shown to have significant impact on genome-wide gene expression, which likely results from changes in metabolic substrate flux. However, there has been no comprehensive study on the acute effects of individual sugars on the genome-wide gene expression that may reveal the genetic changes altering signaling pathways, subsequent metabolic processes, and ultimately physiological/pathological responses. Considering that gene expressions in response to acute carbohydrate ingestion might be different in nutrient sensitive and insensitive mammals, we conducted comparative studies of genome-wide gene expression by deep mRNA sequencing of the liver in nutrient sensitive C57BL/6J and nutrient insensitive BALB/cJ mice. Furthermore, to determine the temporal responses, we compared livers from mice in the fasted state and following ingestion of standard laboratory mouse chow supplemented with plain drinking water or water containing 20% glucose, sucrose, or fructose. Supplementation with these carbohydrates induced unique extents and temporal changes in gene expressions in a strain specific manner. Fructose and sucrose stimulated gene changes peaked at 3 h postprandial, whereas glucose effects peaked at 12 h and 6 h postprandial in C57BL/6J and BABL/cJ mice, respectively. Network analyses revealed that fructose changed genes were primarily involved in lipid metabolism and were more complex in C57BL/6J than in BALB/cJ mice. These data demonstrate that there are qualitative and antitative differences in the normal physiological responses of the liver between these two strains of mice and C57BL/6J is more sensitive to sugar intake than BALB/cJ.

Indexed as

Dietary SupplementsAnimalsDietary CarbohydratesDown-RegulationEatingFastingFructoseGlucoseLipid MetabolismLiverMaleMiceMice, Inbred BALB CMice, Inbred C57BLSignal TransductionSpecies SpecificityDietary CarbohydratesFructoseGlucoseSucroseBALB/cJC57BL/6Jdietary carbohydratesmRNA-seqtranscriptome

Identifiers

PMID34643091
PMCPMC8616594
OpenAlexW3206256848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.