Evidence map›Paper›PMID 34638425›Full record

ArticleCancers2021

A Geant4-DNA Evaluation of Radiation-Induced DNA Damage on a Human Fibroblast.

Wook-Geun Shin, Dousatsu Sakata, Nathanael Lampe, Oleg Belov, Ngoc Hoang Tran, Ivan Petrovic, Aleksandra Ristic-Fira, Milos Dordevic, Mario A Bernal, Marie-Claude Bordage and 9 more

Abstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Wook-Geun ShinBordeaux University, CNRS/IN2P3, CENBG, UMR 5797, 33170 Gradignan, France.ORCID 0000-0002-8622-1888
Dousatsu SakataDepartment of Accelerator and Medical Physics, Institute for Quantum Medical Science, QST, Chiba 263-8555, Japan.ORCID 0000-0002-8398-3334
Nathanael LampeUnaffiliated, Melbourne, Australia.ORCID 0000-0002-0593-1766
Oleg BelovVeksler and Baldin Laboratory of High Energy Physics, Joint Institute for Nuclear Research, 141980 Dubna, Russia.ORCID 0000-0002-9429-3793
Ngoc Hoang TranBordeaux University, CNRS/IN2P3, CENBG, UMR 5797, 33170 Gradignan, France.
Ivan PetrovicVinča Institute of Nuclear Sciences, University of Belgrade, 11000 Belgrade, Serbia.ORCID 0000-0001-5553-3160
Aleksandra Ristic-FiraVinča Institute of Nuclear Sciences, University of Belgrade, 11000 Belgrade, Serbia.ORCID 0000-0002-8002-8470
Milos DordevicVinča Institute of Nuclear Sciences, University of Belgrade, 11000 Belgrade, Serbia.ORCID 0000-0002-8407-3236
Mario A BernalInsitituto de Fisica Gleb Wataghin, Universidade Estadual de Campinas, Campinas 13083-859, SP, Brazil.
Marie-Claude BordageUniversite Toulouse III-Paul Sabatier, UMR 1037, CRCT, 31034 Toulouse, France.ORCID 0000-0003-4735-7325
Ziad FrancisSaint Joseph University of Beirut, Research Unit Mathematics and Modeling, Beirut 1004 2020, Lebanon.
Ioanna KyriakouMedical Physics Laboratory, Department of Medicine, University of Ioannina, 45110 Ioannina, Greece.ORCID 0000-0003-2105-4078
Yann PerrotInstitut de Radioprotection et de Sûreté Nucléaire (IRSN), BP17, 92262 Fontenay aux Roses, France.ORCID 0000-0001-9043-5857
Takashi SasakiKEK, 1-1, Oho, Tsukuba, Ibaraki 305-0801, Japan.
Carmen VillagrasaInstitut de Radioprotection et de Sûreté Nucléaire (IRSN), BP17, 92262 Fontenay aux Roses, France.
Susanna GuatelliCentre for Medical Radiation Physics, University of Wollongong, Wollongong, NSW 2522, Australia.
Vincent BretonClermont Auvergne University, CNRS/IN2P3, LPC, 63000 Clermont-Ferrand, France.
Dimitris EmfietzoglouMedical Physics Laboratory, Department of Medicine, University of Ioannina, 45110 Ioannina, Greece.
Sebastien IncertiBordeaux University, CNRS/IN2P3, CENBG, UMR 5797, 33170 Gradignan, France.ORCID 0000-0002-0619-2053

Funding

Centre National de la Recherche Scientifique PICS #8070Conselho Nacional de Desenvolvimento Científico e Tecnológico 306298/2018-0European Space Agency 4000126645/19/NL/BEuropean Space Agency 4000132935/21/NL/CRSFundação de Amparo à Pesquisa do Estado de São Paulo 2011/51594-2, 2015/21873-8, 2018/15316- 7, and 2020/08647-7Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja 173020Université de Bordeaux Initiative of Excellence International Doctorates
6 · The paper itself

Abstract

Accurately modeling the radiobiological mechanisms responsible for the induction of DNA damage remains a major scientific challenge, particularly for understanding the effects of low doses of ionizing radiation on living beings, such as the induction of carcinogenesis. A computational approach based on the Monte Carlo technique to simulate track structures in a biological medium is currently the most reliable method for calculating the early effects induced by ionizing radiation on DNA, the primary cellular target of such effects. The Geant4-DNA Monte Carlo toolkit can simulate not only the physical, but also the physico-chemical and chemical stages of water radiolysis. These stages can be combined with simplified geometric models of biological targets, such as DNA, to assess direct and indirect early DNA damage. In this study, DNA damage induced in a human fibroblast cell was evaluated using Geant4-DNA as a function of incident particle type (gammas, protons, and alphas) and energy. The resulting double-strand break yields as a function of linear energy transfer closely reproduced recent experimental data. Other quantities, such as fragment length distribution, scavengeable damage fraction, and time evolution of damage within an analytical repair model also supported the plausibility of predicting DNA damage using Geant4-DNA.The complete simulation chain application "molecularDNA", an example for users of Geant4-DNA, will soon be distributed through Geant4.

Indexed as

DNA damageGeant4-DNAMonte Carlo track structure simulation

Identifiers

PMID34638425
PMCPMC8508455

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.