Evidence map›Paper›PMID 34638179›Full record

ArticleGenomics & informatics2021

Draft genome of Semisulcospira libertina, a species of freshwater snail.

Jeong-An Gim, Kyung-Wan Baek, Young-Sool Hah, Ho Jin Choo, Ji-Seok Kim, Jun-Il Yoo

Abstract read
In one paragraph

Article in Genomics & informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jeong-An GimMedical Science Research Center, Korea University Guro Hospital, Korea University College of Medicine, Seoul 08308, Korea.
Kyung-Wan BaekDepartment of Physical Education, Gyeongsang National University, Jinju 52727, Korea.
Young-Sool HahBiomedical Research Institute, Gyeongsang National University Hospital, Jinju 52727, Korea.
Ho Jin ChooSouth Korea 4H Association, Seoul 05269, Korea.
Ji-Seok KimDepartment of Physical Education, Gyeongsang National University, Jinju 52727, Korea.
Jun-Il YooDepartment of Orthopaedic Surgery, Gyeongsang National University Hospital, Jinju 52727, Korea.

Funding

Ministry of SMEs and Startups' 2018 technology development project to foster regional key industries P0002726
6 · The paper itself

Abstract

Semisulcospira libertina, a species of freshwater snail, is widespread in East Asia. It is important as a food source. Additionally, it is a vector of clonorchiasis, paragonimiasis, metagonimiasis, and other parasites. Although S. libertina has ecological, commercial, and clinical importance, its whole-genome has not been reported yet. Here, we revealed the genome of S. libertina through de novo assembly. We assembled the whole-genome of S. libertina and determined its transcriptome for the first time using Illumina NovaSeq 6000 platform. According to the k-mer analysis, the genome size of S. libertina was estimated to be 3.04 Gb. Using RepeatMasker, a total of 53.68% of repeats were identified in the genome assembly. Genome data of S. libertina reported in this study will be useful for identification and conservation of S. libertina in East Asia.

Indexed as

de novo assemblydraft genomeSemisulcospisa libertina

Identifiers

PMID34638179
PMCPMC8510874

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.