Evidence map›Paper›PMID 34635729›Full record

ArticleScientific reports2021

Transcriptome analysis and connectivity mapping of Cissampelos pareira L. provides molecular links of ESR1 modulation to viral inhibition.

Madiha Haider, Dhwani Dholakia, Aleksha Panwar, Parth Garg, Atish Gheware, Dayanidhi Singh, Khushboo Singhal, Shaunak A Burse, Surekha Kumari, Anmol Sharma and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. A scoping review of clinicalFrontiers in medicine · 2026
    Pooled it
  2. Phytochemical Screening andMediators of inflammation · 2025
    Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. AnJournal of Ayurveda and integrative medicine
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Madiha Haider *Genomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Dhwani Dholakia *Genomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Aleksha PanwarTranslational Health Science and Technology Institute, Faridabad, Haryana, 121001, India.
Parth GargIndraprastha Institute of Information Technology, Delhi, 110020, India.
Atish GhewareGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Dayanidhi SinghGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Khushboo SinghalGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Shaunak A BurseGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India.
Surekha KumariAcademy of Scientific and Innovative Research, Ghaziabad, Uttar Pradesh, 201002, India.
Anmol SharmaAcademy of Scientific and Innovative Research, Ghaziabad, Uttar Pradesh, 201002, India.
Arjun RayIndraprastha Institute of Information Technology, Delhi, 110020, India.
Guruprasad R MedigeshiTranslational Health Science and Technology Institute, Faridabad, Haryana, 121001, India.
Upendra SharmaAcademy of Scientific and Innovative Research, Ghaziabad, Uttar Pradesh, 201002, India.
Bhavana PrasherGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India. bhavana.p@igib.res.in.
Mitali MukerjiGenomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, 110020, India. mitali@igib.res.in.
Institute of Genomics and Integrative Biology · INAcademy of Scientific and Innovative Research · INIndraprastha Institute of Information Technology Delhi · INInstitute of Himalayan Bioresource Technology · INTranslational Health Science and Technology Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bioactive fractions obtained from medicinal plants which have been used for the treatment of multiple diseases could exert their effects by targeting common pathways. Prior knowledge of their usage could allow us to identify novel molecular links. In this study, we explored the molecular basis of action of one such herbal formulation Cissampelos pareira L. (Cipa), used for the treatment of female hormone disorders and fever. Transcriptomic studies on MCF7 cell lines treated with Cipa extract carried out using Affymetrix arrays revealed a downregulation of signatures of estrogen response potentially modulated through estrogen receptor α (ERα). Molecular docking analysis identified 38 Cipa constituents that potentially bind (ΔG <  - 7.5) with ERα at the same site as estrogen. The expression signatures in the connectivity map ( https://clue.io/; ) revealed high positive scores with translation inhibitors such as emetine (score: 99.61) and knockdown signatures of genes linked to the antiviral response such as ribosomal protein RPL7 (score: 99.92), which is a reported ERα coactivator. Further, gene knockdown experiments revealed that Cipa exhibits antiviral activity in dengue infected MCF7 cells potentially modulated through estrogen receptor 1. This approach reveals a novel pathway involving the ESR1-RPL7 axis which could be a potential target in dengue viral infection.

Indexed as

Antiviral AgentsBreast NeoplasmsCissampelosDengueDengue VirusEstrogen Receptor alphaFemaleHumansMCF-7 CellsPlant ExtractsTranscriptomeAntiviral AgentsESR1 protein, humanEstrogen Receptor alphaPlant Extracts

Identifiers

PMID34635729
PMCPMC8505412
OpenAlexW3206733909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.