Evidence map›Paper›PMID 34633713›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2021

Fast and Efficient Postsynthetic DNA Labeling in Cells by Means of Strain-Promoted Sydnone-Alkyne Cycloadditions.

Katja Krell, Bastian Pfeuffer, Franziska Rönicke, Zoeisha S Chinoy, Camille Favre, Frédéric Friscourt, Hans-Achim Wagenknecht

Abstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Fluorogenic Sydnones for Bioorthogonal Labeling of DNA.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Katja KrellInstitute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.
Bastian PfeufferInstitute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.
Franziska RönickeInstitute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.
Zoeisha S ChinoyInstitut Européen de Chimie et Biologie and ISM CNRS UMR5255, Université de Bordeaux, 2 Rue Robert Escarpit, 33607, Pessac, France.
Camille FavreInstitut Européen de Chimie et Biologie and ISM CNRS UMR5255, Université de Bordeaux, 2 Rue Robert Escarpit, 33607, Pessac, France.
Frédéric FriscourtInstitut Européen de Chimie et Biologie and ISM CNRS UMR5255, Université de Bordeaux, 2 Rue Robert Escarpit, 33607, Pessac, France.ORCID http://orcid.org/0000-0002-0749-0861
Hans-Achim WagenknechtInstitute of Organic Chemistry, Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany.ORCID http://orcid.org/0000-0003-4849-2887

Funding

DFG DFG Wa 1386/15-2lABORATORY OF eXCELLENCE ANR-10-LABX-57
6 · The paper itself

Abstract

Sydnones are highly stable mesoionic 1,3-dipoles that react with cyclooctynes through strain-promoted sydnone-alkyne cycloaddition (SPSAC). Although sydnones have been shown to be valuable bioorthogonal chemical reporters for the labeling of proteins and complex glycans, nucleic acids have not yet been tagged by SPSAC. Evaluation of SPSAC kinetics with model substrates showed fast reactions with cyclooctyne probes (up to k=0.59 M

Indexed as

AlkynesSydnonesCycloaddition ReactionDNAProteinsAlkynesDNAProteinsSydnonescell biology cyclooctynefluorescenceoligonucleotidestrainsydnone

Identifiers

PMID34633713
PMCPMC9297951

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.