Evidence map›Paper›PMID 34631700›Full record

ArticleFrontiers in cell and developmental biology2021

A Risk Score Model Incorporating Three m6A RNA Methylation Regulators and a Related Network of miRNAs-m6A Regulators-m6A Target Genes to Predict the Prognosis of Patients With Ovarian Cancer.

Qian Li, Chen-Chen Ren, Yan-Nan Chen, Li Yang, Feng Zhang, Bao-Jin Wang, Yuan-Hang Zhu, Fei-Yan Li, Jun Yang, Zhen-An Zhang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

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  9. Article
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  12. The risk of COVID-19 can be predicted by a nomogram based on m6A-related genes.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2022
    Article
  13. Roles of NExperimental hematology & oncology · 2022
    Review
  14. Article
  15. LncRNAFrontiers in oncology · 2022
    Article
  16. HNRNPA2B1 Demonstrates Diagnostic and Prognostic Values Based on Pan-Cancer Analyses.Computational and mathematical methods in medicine · 2022
    Article
  17. Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Qian LiDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Chen-Chen RenDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Yan-Nan ChenDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Li YangDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Feng ZhangDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Bao-Jin WangThe Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Yuan-Hang ZhuDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Fei-Yan LiDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Jun YangDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Zhen-An ZhangDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Third Affiliated Hospital of Zhengzhou University · CNZhengzhou Children's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ovarian cancer (OC) is the leading cause of cancer-related death among all gynecological tumors. N6-methyladenosine (m6A)-related regulators play essential roles in various tumors, including OC. However, the expression of m6A RNA methylation regulators and the related regulatory network in OC and their correlations with prognosis remain largely unknown. In the current study, we obtained the genome datasets of OC from GDC and GTEx database and analyzed the mRNA levels of 21 key m6A regulators in OC and normal human ovarian tissues. The expression levels of 7 m6A regulators were lower in both the OC tissues and the high-stage group. Notably, the 5-year survival rate of patients with OC presenting low VIRMA expression or high HNRNPA2B1 expression was higher than that of the controls. Next, a risk score model based on the three selected m6A regulators (VIRMA, IGF2BP1, and HNRNPA2B1) was built by performing a LASSO regression analysis, and the moderate accuracy of the risk score model to predict the prognosis of patients with OC was examined by performing ROC curve, nomogram, and univariate and multivariate Cox regression analyses. In addition, a regulatory network of miRNAs-m6A regulators-m6A target genes, including 2 miRNAs, 3 m6A regulators, and 47 mRNAs, was constructed, and one of the pathways, namely, miR-196b-5p-IGF2BP1-PTEN, was initially validated based on bioinformatic analysis and assay verification. These results demonstrated that the risk score model composed of three m6A RNA methylation regulators and the related network of miRNAs-m6A regulators-m6A target genes is valuable for predicting the prognosis of patients with OC, and these molecules may serve as potential biomarkers or therapeutic targets in the future.

Indexed as

m6Aovarian cancerprognosisrisk modelRNA methylation

Identifiers

PMID34631700
PMCPMC8495156
OpenAlexW3203629686

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.