Evidence map›Paper›PMID 34626117›Full record

ArticleMolecular biology and evolution2022

Rapid Gene Evolution in an Ancient Post-transcriptional and Translational Regulatory System Compensates for Meiotic X Chromosomal Inactivation.

Shengqian Xia, Iuri M Ventura, Andreas Blaha, Annamaria Sgromo, Shuaibo Han, Elisa Izaurralde, Manyuan Long

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. TheFrontiers in genetics · 2022
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Shengqian XiaDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.
Iuri M VenturaDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.
Andreas BlahaDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Annamaria SgromoDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Shuaibo HanDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.
Elisa IzaurraldeDepartment of Biochemistry, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Manyuan LongDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.
University of Chicago · USMax Planck Institute for Developmental Biology · DE

Funding

Reference-quality Drosophila genome assemblies for evolutionary analysis of previously inaccessible genomic regionsR01GM116113 · NIGMS · UNIVERSITY OF ARIZONA · PI CLARK, ANDREW G, LONG, MANYUAN · 2016 to 2019
$2.3M
NIGMS NIH HHS R01 GM116113
6 · The paper itself

Abstract

It is conventionally assumed that conserved pathways evolve slowly with little participation of gene evolution. Nevertheless, it has been recently observed that young genes can take over fundamental functions in essential biological processes, for example, development and reproduction. It is unclear how newly duplicated genes are integrated into ancestral networks and reshape the conserved pathways of important functions. Here, we investigated origination and function of two autosomal genes that evolved recently in Drosophila: Poseidon and Zeus, which were created by RNA-based duplications from the X-linked CAF40, a subunit of the conserved CCR4-NOT deadenylase complex involved in posttranscriptional and translational regulation. Knockdown and knockout assays show that the two genes quickly evolved critically important functions in viability and male fertility. Moreover, our transcriptome analysis demonstrates that the three genes have a broad and distinct effect in the expression of hundreds of genes, with almost half of the differentially expressed genes being perturbed exclusively by one paralog, but not the others. Co-immunoprecipitation and tethering assays show that the CAF40 paralog Poseidon maintains the ability to interact with the CCR4-NOT deadenylase complex and might act in posttranscriptional mRNA regulation. The rapid gene evolution in the ancient posttranscriptional and translational regulatory system may be driven by evolution of sex chromosomes to compensate for the meiotic X chromosomal inactivation (MXCI) in Drosophila.

Indexed as

Drosophila ProteinsX Chromosome InactivationAnimalsDrosophilaEvolution, MolecularGenes, X-LinkedMaleDrosophila ProteinsCAF40CCR4–NOTMSCIMXCInew gene functionPoseidonZeus

Identifiers

PMID34626117
PMCPMC8763131
OpenAlexW3202893083

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.