Evidence map›Paper›PMID 34624079›Full record

ArticleBlood2022

SHMT2 inhibition disrupts the TCF3 transcriptional survival program in Burkitt lymphoma.

Anne C Wilke, Carmen Doebele, Alena Zindel, Kwang Seok Lee, Sara A Rieke, Michele Ceribelli, Federico Comoglio, James D Phelan, James Q Wang, Yana Pikman and 35 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

45 authors at 17 institutions in 6 countries.

Anne C WilkeDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Carmen DoebeleDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Alena ZindelDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Kwang Seok LeeMolecular Therapy in Haematology and Oncology and Department of Translational Oncology, NCT and DKFZ, Heidelberg, Germany.ORCID 0000-0001-7682-5736
Sara A RiekeDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.ORCID 0000-0002-2890-1308
Michele CeribelliDivision of Pre-Clinical Innovation, National Center for Advancing Translational Sciences (NCATS), National Institutes of Health, Rockville, MD.
Federico ComoglioenGene Statistics GmbH, Basel, Switzerland.ORCID 0000-0002-8970-6610
James D PhelanLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD.
James Q WangLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Yana PikmanDivision of Hematology/Oncology, Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, MA.
Dominique JahnDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Björn HäuplDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Constanze SchneiderDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Sebastian ScheichDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Frances A TostoDivision of Pre-Clinical Innovation, National Center for Advancing Translational Sciences (NCATS), National Institutes of Health, Rockville, MD.
Hanibal BohnenbergerInstitute of Pathology, University Medical Center Göttingen, Göttingen, Germany.ORCID 0000-0003-1038-1030
Philipp StauderInstitute of Pathology, University Medical Center Göttingen, Göttingen, Germany.ORCID 0000-0002-3876-6023
Frank SchnütgenDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.ORCID 0000-0002-2426-6685
Mikolaj SlabickiMolecular Therapy in Haematology and Oncology and Department of Translational Oncology, NCT and DKFZ, Heidelberg, Germany.
Zana A CoulibalyLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Sebastian WolfDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.
Kamil BojarczukDepartment of Hematology and Oncology, Georg August University, Göttingen, Germany.
Björn ChapuyDepartment of Hematology and Oncology, Georg August University, Göttingen, Germany.ORCID 0000-0002-6485-8773
Christian H BrandtsDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.ORCID 0000-0003-1732-2535
Philipp StroebelInstitute of Pathology, University Medical Center Göttingen, Göttingen, Germany.ORCID 0000-0002-8528-8060
Caroline A LewisWhitehead Institute for Biomedical Research, Cambridge, MA.
Michael EngelkeInstitute of Cellular and Molecular Immunology, Georg August University of Göttingen, Göttingen, Germany.
Xincheng XuLewis-Sigler Institute for Integrative Genomics.ORCID 0000-0003-1062-2092
Hahn KimDepartment of Chemistry, and.
Thanh Hung DangInstitute for Pathology, Molecular Cytology and Functional Genomics, University Hospital Giessen, Giessen, Germany.
Roland SchmitzInstitute for Pathology, Molecular Cytology and Functional Genomics, University Hospital Giessen, Giessen, Germany.ORCID 0000-0002-3348-6807
Daniel J HodsonWellcome MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK.ORCID 0000-0001-6225-2033
Kimberly StegmaierDivision of Hematology/Oncology, Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, MA.
Henning UrlaubBioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Hubert ServeDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.ORCID 0000-0001-8472-5516
Clemens A SchmittGerman Cancer Research Center and German Cancer Consortium, Heidelberg, Germany.ORCID 0000-0002-4731-2226
Fernando KreuzDepartment I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, and.
Gero KnittelDepartment I of Internal Medicine, Faculty of Medicine and University Hospital Cologne, and.ORCID 0000-0001-8395-3701
Joshua D RabinowitzLewis-Sigler Institute for Integrative Genomics.ORCID 0000-0002-1247-4727
Hans Christian ReinhardtGerman Cancer Research Center and German Cancer Consortium, Heidelberg, Germany.
Matthew G Vander HeidenKoch Institute for Cancer Research at MIT, Cambridge, MA.
Craig ThomasDivision of Pre-Clinical Innovation, National Center for Advancing Translational Sciences (NCATS), National Institutes of Health, Rockville, MD.
Louis M StaudtLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD.
Thorsten ZenzMolecular Therapy in Haematology and Oncology and Department of Translational Oncology, NCT and DKFZ, Heidelberg, Germany.
Thomas OellerichDepartment of Medicine II, Department for Hematology/Oncology, Goethe University, Frankfurt, Germany.ORCID 0000-0001-6570-6125
Goethe University Frankfurt · DENational Institutes of Health · USUniversitätsmedizin Göttingen · DEBoston Children's Hospital · USHeidelberg University · DEInstitute for Integrative and Experimental Genomics · DEUniversity of Cologne · DEUniversity of Göttingen · DEDana-Farber Cancer Institute · USGerman Cancer Research Center · DEInstytut Hematologii i Transfuzjologi · PLJohannes Kepler University of Linz · ATMax Planck Institute for Biophysical Chemistry · DEPrinceton University · USUniversity of Zurich · CHWellcome/MRC Cambridge Stem Cell Institute · GBWhitehead Institute for Biomedical Research · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Kristin A Knouse · 1985 to 2026
$93.9M
Oncogenic mechanisms and molecular targets in lymphomaZIABC011008 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI STAUDT, LOUIS · 2009 to 2025
$21.0M
Molecular diagnosis and outcome prediction in lymphomaZIABC011006 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI STAUDT, LOUIS · 2009 to 2025
$21.0M
RNA interference-based screens for molecular targets in cancerZIABC011007 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI STAUDT, LOUIS · 2009 to 2025
$21.0M
Scientific Cyberinfrastructure Research ProgramZIAES103385 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WALKER, VICKIE · 2022 to 2025
$17.4M
HTS enabled examination of drug combinationsZIATR000047 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI THOMAS, CRAIG · 2015 to 2025
$7.1M
Understanding the role of metabolism in cancerR35CA242379 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI VANDER HEIDEN, MATTHEW G. · 2019 to 2025
$5.8M
Targeting mitochondrial one carbon folate metabolism for novel T-cell acute lymphoblastic leukemia therapyK08CA222684 · NCI · DANA-FARBER CANCER INST · PI PIKMAN, YANA · 2018 to 2022
$886k
Medical Research Council MC_PC_17230NCI NIH HHS K08 CA222684NCI NIH HHS P30 CA014051NCI NIH HHS R35 CA242379
6 · The paper itself

Abstract

Burkitt lymphoma (BL) is an aggressive lymphoma type that is currently treated by intensive chemoimmunotherapy. Despite the favorable clinical outcome for most patients with BL, chemotherapy-related toxicity and disease relapse remain major clinical challenges, emphasizing the need for innovative therapies. Using genome-scale CRISPR-Cas9 screens, we identified B-cell receptor (BCR) signaling, specific transcriptional regulators, and one-carbon metabolism as vulnerabilities in BL. We focused on serine hydroxymethyltransferase 2 (SHMT2), a key enzyme in one-carbon metabolism. Inhibition of SHMT2 by either knockdown or pharmacological compounds induced anti-BL effects in vitro and in vivo. Mechanistically, SHMT2 inhibition led to a significant reduction of intracellular glycine and formate levels, which inhibited the mTOR pathway and thereby triggered autophagic degradation of the oncogenic transcription factor TCF3. Consequently, this led to a collapse of tonic BCR signaling, which is controlled by TCF3 and is essential for BL cell survival. In terms of clinical translation, we also identified drugs such as methotrexate that synergized with SHMT inhibitors. Overall, our study has uncovered the dependency landscape in BL, identified and validated SHMT2 as a drug target, and revealed a mechanistic link between SHMT2 and the transcriptional master regulator TCF3, opening up new perspectives for innovative therapies.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsBurkitt LymphomaCell Line, TumorCell SurvivalDrug DiscoveryFormatesGene Expression Regulation, NeoplasticGene Knockdown TechniquesGlycineGlycine HydroxymethyltransferaseHumansMiceMolecular Targeted TherapyProteolysisBasic Helix-Loop-Helix ProteinsFormatesformic acidGlycineGlycine HydroxymethyltransferaseSHMT protein, humanTCF3 protein, human

Identifiers

PMID34624079
PMCPMC8938936
OpenAlexW3204487665

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.