Evidence map›Paper›PMID 34622958›Full record

ArticleThe Journal of comparative neurology2022

Satb1 expression in retinal ganglion cells of marmosets, macaques, and humans.

Subha Nasir-Ahmad, Kurt A Vanstone, Mario Novelli, Sammy C S Lee, Michael Tri H Do, Paul R Martin, Ulrike Grünert

Open access · greenAbstract read
In one paragraph

Article in The Journal of comparative neurology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Subha Nasir-AhmadFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.
Kurt A VanstoneFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.
Mario NovelliFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.
Sammy C S LeeFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.ORCID 0000-0001-9220-6097
Michael Tri H DoF.M. Kirby Neurobiology Center and Department of Neurology, Boston Children's Hospital and Harvard Medical School, Boston, Massachusetts, USA.ORCID 0000-0001-6418-0977
Paul R MartinFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.ORCID 0000-0002-5166-9658
Ulrike GrünertFaculty of Medicine and Health, Save Sight Institute, and Discipline of Ophthalmology, The University of Sydney, Sydney, Australia.ORCID 0000-0002-9595-8152
The University of Sydney · AUBoston Children's Hospital · US

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SCOTT Loren POMEROY, MUSTAFA SAHIN · 2021 to 2026
$9.4M
Intrinsically photosensitive retinal ganglion cells and their central projectionsR01EY025555 · NEI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DO, MICHAEL TRI HOANG, GAMLIN, PAUL DOUGLAS · 2016 to 2020
$3.9M
NEI NIH HHS EY025555NEI NIH HHS R01 EY025555NICHD NIH HHS P50 HD105351
6 · The paper itself

Abstract

Recent advances in single-cell RNA sequencing have enabled the molecular distinction of ganglion cell populations in mammalian retinas. Here we used antibodies against the transcription factor special AT-rich binding protein 1 (Satb1, a protein which is expressed by on-off direction-selective ganglion cells in mouse retina) to study Satb1 expression in the retina of marmosets (Callithrix jacchus), macaques (Macaca fascicularis), and humans. In all species, Satb1 was exclusively expressed in retinal ganglion cells. The Satb1 cells made up ∼2% of the ganglion cell population in the central retina of all species, rising to a maximum ∼7% in peripheral marmoset retina. Intracellular injections in marmoset and macaque retinas revealed that most Satb1 expressing ganglion cells are widefield ganglion cells. In marmoset, Satb1 cells have a densely branching dendritic tree and include broad and narrow thorny, recursive bistratified, and parasol cells, all of which show some costratification with the outer or inner cholinergic amacrine cells. The recursive bistratified cells showed the strongest costratification but did not show extensive cofasciculation as reported for on-off direction-selective ganglion cells in rabbit and rodent retinas. In macaque, Satb1 was not expressed in recursive bistratified cells, but in large sparsely branching cells. Our findings further support the idea that the expression of transcription factors in retinal ganglion cells is not conserved across Old World (human and macaque) and New World (marmoset) primates and provides a further step to link a molecular marker with specific cell types.

Indexed as

AnimalsCallithrixHumansMacaca fascicularisMatrix Attachment Region Binding ProteinsRetinal Ganglion CellsSpecies SpecificityMatrix Attachment Region Binding ProteinsSATB1 protein, humanCallithrix jacchushumanMacaca fascicularisretinal ganglion cellsSatb1transcription factors

Identifiers

PMID34622958
PMCPMC8831458
OpenAlexW3204367934

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.