Evidence map›Paper›PMID 34622934›Full record

ArticleThe Biochemical journal2021

Cryo-EM structure of the dimeric Rhodobacter sphaeroides RC-LH1 core complex at 2.9 Å: the structural basis for dimerisation.

Pu Qian, Tristan I Croll, Andrew Hitchcock, Philip J Jackson, Jack H Salisbury, Pablo Castro-Hartmann, Kasim Sader, David J K Swainsbury, C Neil Hunter

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

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  9. Tuning by Hydrogen Bonding in Photosynthesis.The journal of physical chemistry. B · 2024
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  15. Cryo-EM structure of the four-subunitProceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 5 countries.

Pu QianMaterials and Structural Analysis, Thermo Fisher Scientific, Achtseweg Noord 5, 5651 GG Eindhoven, Netherlands.ORCID 0000-0002-5888-8546
Tristan I CrollCambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, U.K.ORCID 0000-0002-3514-8377
Andrew HitchcockSchool of Biosciences, University of Sheffield, Sheffield S10 2TN, U.K.ORCID 0000-0001-6572-434X
Philip J JacksonSchool of Biosciences, University of Sheffield, Sheffield S10 2TN, U.K.ORCID 0000-0001-9671-2472
Jack H SalisburySchool of Biosciences, University of Sheffield, Sheffield S10 2TN, U.K.ORCID 0000-0002-9527-0593
Pablo Castro-HartmannMaterials and Structural Analysis, Thermo Fisher Scientific, Achtseweg Noord 5, 5651 GG Eindhoven, Netherlands.ORCID 0000-0002-8991-9560
Kasim SaderMaterials and Structural Analysis, Thermo Fisher Scientific, Achtseweg Noord 5, 5651 GG Eindhoven, Netherlands.ORCID 0000-0002-8517-5410
David J K SwainsburySchool of Biosciences, University of Sheffield, Sheffield S10 2TN, U.K.ORCID 0000-0002-0754-0363
C Neil HunterSchool of Biosciences, University of Sheffield, Sheffield S10 2TN, U.K.ORCID 0000-0003-2533-9783
University of Sheffield · GBThermo Fisher Scientific (Netherlands) · NLUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M000265/1Wellcome Trust 209407/Z/17/Z
6 · The paper itself

Abstract

The dimeric reaction centre light-harvesting 1 (RC-LH1) core complex of Rhodobacter sphaeroides converts absorbed light energy to a charge separation, and then it reduces a quinone electron and proton acceptor to a quinol. The angle between the two monomers imposes a bent configuration on the dimer complex, which exerts a major influence on the curvature of the membrane vesicles, known as chromatophores, where the light-driven photosynthetic reactions take place. To investigate the dimerisation interface between two RC-LH1 monomers, we determined the cryogenic electron microscopy structure of the dimeric complex at 2.9 Å resolution. The structure shows that each monomer consists of a central RC partly enclosed by a 14-subunit LH1 ring held in an open state by PufX and protein-Y polypeptides, thus enabling quinones to enter and leave the complex. Two monomers are brought together through N-terminal interactions between PufX polypeptides on the cytoplasmic side of the complex, augmented by two novel transmembrane polypeptides, designated protein-Z, that bind to the outer faces of the two central LH1 β polypeptides. The precise fit at the dimer interface, enabled by PufX and protein-Z, by C-terminal interactions between opposing LH1 αβ subunits, and by a series of interactions with a bound sulfoquinovosyl diacylglycerol lipid, bring together each monomer creating an S-shaped array of 28 bacteriochlorophylls. The seamless join between the two sets of LH1 bacteriochlorophylls provides a path for excitation energy absorbed by one half of the complex to migrate across the dimer interface to the other half.

Indexed as

Bacterial ProteinsLight-Harvesting Protein ComplexesDimerizationMolecular StructureRhodobacter sphaeroidesBacterial Proteinslight-harvesting complex 1, RhodospirillumLight-Harvesting Protein Complexesbacteriochlorophyllscarotenoidslight harvestingphotosynthesisreaction centretransmembrane proteins

Identifiers

PMID34622934
PMCPMC8652583
OpenAlexW3203403268

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.