Evidence map›Paper›PMID 34620876›Full record

ArticleNature communications2021

RN7SK small nuclear RNA controls bidirectional transcription of highly expressed gene pairs in skin.

Roberto Bandiera, Rebecca E Wagner, Thiago Britto-Borges, Christoph Dieterich, Sabine Dietmann, Susanne Bornelöv, Michaela Frye

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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  6. A single day of reduced activity alters the next day's transcriptomic and metabolic exercise response.American journal of physiology. Endocrinology and metabolism · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Roberto BandieraDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK.
Rebecca E WagnerGerman Cancer Research Center-Deutsches Krebsforschungszentrum (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.
Thiago Britto-BorgesUniversity Hospital Heidelberg, German Center for Cardiovascular Research (DZHK), Im Neuenheimer Feld 669, 69120, Heidelberg, Germany.ORCID 0000-0002-6218-4429
Christoph DieterichUniversity Hospital Heidelberg, German Center for Cardiovascular Research (DZHK), Im Neuenheimer Feld 669, 69120, Heidelberg, Germany.
Sabine DietmannWashington University School of Medicine in St. Louis, 660S. Euclid Ave, St. Louis, MO, 63110, USA.
Susanne BornelövWellcome-MRC Cambridge Stem Cell Institute, University of Cambridge, Puddicombe Way, Cambridge, CB2 0AW, UK. smb208@cam.ac.uk.ORCID 0000-0001-9276-9981
Michaela FryeGerman Cancer Research Center-Deutsches Krebsforschungszentrum (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany. M.Frye@dkfz.de.ORCID 0000-0002-5636-6840
German Cancer Research Center · DEHeidelberg University · DEUniversity of Cambridge · GBWashington University in St. Louis · USWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Cancer Research UK 15181Cancer Research UK C10701/A15181Medical Research CouncilWellcome Trust
6 · The paper itself

Abstract

Pausing of RNA polymerase II (Pol II) close to promoters is a common regulatory step in RNA synthesis, and is coordinated by a ribonucleoprotein complex scaffolded by the noncoding RNA RN7SK. The function of RN7SK-regulated gene transcription in adult tissue homoeostasis is currently unknown. Here, we deplete RN7SK during mouse and human epidermal stem cell differentiation. Unexpectedly, loss of this small nuclear RNA specifically reduces transcription of numerous cell cycle regulators leading to cell cycle exit and differentiation. Mechanistically, we show that RN7SK is required for efficient transcription of highly expressed gene pairs with bidirectional promoters, which in the epidermis co-regulated cell cycle and chromosome organization. The reduction in transcription involves impaired splicing and RNA decay, but occurs in the absence of chromatin remodelling at promoters and putative enhancers. Thus, RN7SK is directly required for efficient Pol II transcription of highly transcribed bidirectional gene pairs, and thereby exerts tissue-specific functions, such as maintaining a cycling cell population in the epidermis.

Indexed as

Gene Expression RegulationTranscription, GeneticAnimalsCell CycleCell DifferentiationCell ProliferationChromatinChromatin Assembly and DisassemblyEpidermisFemaleHumansKeratinocytesMiceMice, Inbred C57BLMice, KnockoutPromoter Regions, GeneticChromatinRNA Polymerase IIRNA, Small Nuclear

Identifiers

PMID34620876
PMCPMC8497571
OpenAlexW3203925511

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.