Evidence map›Paper›PMID 34620872›Full record

ArticleNature communications2021

Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus.

Michael Habig, Cecile Lorrain, Alice Feurtey, Jovan Komluski, Eva H Stukenbrock

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 92 citations in OpenAlex.

  1. Aspects of plant intelligence (ii).Plant signaling & behavior · 2026
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  11. Distinct evolutionary trajectories following loss of RNA interference inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Direct and indirect selection in a proofreading polymerase.bioRxiv : the preprint server for biology · 2024
    Article
  13. Enhanced oxidative stress resistance in Ustilago maydis and its implications on the virulence.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
  14. Distinct evolutionary trajectories following loss of RNA interference inbioRxiv : the preprint server for biology · 2024
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Michael HabigEnvironmental Genomics, Christian-Albrechts University of Kiel, Kiel, Germany. mhabig@bot.uni-kiel.de.ORCID 0000-0002-8059-806X
Cecile LorrainEnvironmental Genomics, Christian-Albrechts University of Kiel, Kiel, Germany.
Alice FeurteyEnvironmental Genomics, Christian-Albrechts University of Kiel, Kiel, Germany.
Jovan KomluskiEnvironmental Genomics, Christian-Albrechts University of Kiel, Kiel, Germany.
Eva H StukenbrockEnvironmental Genomics, Christian-Albrechts University of Kiel, Kiel, Germany. estukenbrock@bot.uni-kiel.de.ORCID 0000-0001-8590-3345
Christian-Albrechts-Universität zu Kiel · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations are the source of genetic variation and the substrate for evolution. Genome-wide mutation rates appear to be affected by selection and are probably adaptive. Mutation rates are also known to vary along genomes, possibly in response to epigenetic modifications, but causality is only assumed. In this study we determine the direct impact of epigenetic modifications and temperature stress on mitotic mutation rates in a fungal pathogen using a mutation accumulation approach. Deletion mutants lacking epigenetic modifications confirm that histone mark H3K27me3 increases whereas H3K9me3 decreases the mutation rate. Furthermore, cytosine methylation in transposable elements (TE) increases the mutation rate 15-fold resulting in significantly less TE mobilization. Also accessory chromosomes have significantly higher mutation rates. Finally, we find that temperature stress substantially elevates the mutation rate. Taken together, we find that epigenetic modifications and environmental conditions modify the rate and the location of spontaneous mutations in the genome and alter its evolutionary trajectory.

Indexed as

Epigenesis, GeneticMutagenesisMutation RateAscomycotaDNA MethylationDNA Transposable ElementsEvolution, MolecularFungiGenomic InstabilityHistone CodeHistonesMutationMutation AccumulationTemperatureDNA Transposable ElementsHistones

Identifiers

PMID34620872
PMCPMC8497519
OpenAlexW3202782643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.