Evidence map›Paper›PMID 34620870›Full record

ArticleNPJ genomic medicine2021

Haplotyping-based preimplantation genetic testing reveals parent-of-origin specific mechanisms of aneuploidy formation.

Olga Tšuiko, Michiel Vanneste, Cindy Melotte, Jia Ding, Sophie Debrock, Heleen Masset, Maire Peters, Andres Salumets, Anne De Leener, Céline Pirard and 7 more

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 4 countries.

Olga TšuikoDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium.
Michiel VannesteDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium.ORCID http://orcid.org/0000-0003-0222-5740
Cindy MelotteDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium.
Jia DingDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium.
Sophie DebrockLeuven University Fertility Center, University Hospitals Leuven, Leuven, 3000, Belgium.
Heleen MassetLaboratory of Cytogenetics and Genome Research, Centre for Human Genetics, KU Leuven, Leuven, 3000, Belgium.
Maire PetersDepartment of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, 50406, Estonia.
Andres SalumetsDepartment of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu, Tartu, 50406, Estonia.
Anne De LeenerCentre for Human Genetics, Cliniques Universitaires Saint Luc, UCLouvain, Brussels, 1200, Belgium.
Céline PirardDepartment of Gynaecology, Cliniques Universitaires Saint Luc, UCLouvain, Brussels, 1200, Belgium.
Candice KluyskensDepartment of Gynaecology, Cliniques Universitaires Saint Luc, UCLouvain, Brussels, 1200, Belgium.
Katleen HostensCentre for Reproductive Medicine (CRG)-Brugge-Kortrijk, AZ Sint-Jan Brugge-Oostende AV, Brugge, 8000, Belgium.
Arne van de VijverCentre for Reproductive Medicine (CRG)-Brugge-Kortrijk, AZ Sint-Jan Brugge-Oostende AV, Brugge, 8000, Belgium.
Karen PeeraerLeuven University Fertility Center, University Hospitals Leuven, Leuven, 3000, Belgium.
Ellen DenayerDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium.
Joris Robert VermeeschDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium. joris.vermeesch@uzleuven.be.
Eftychia DimitriadouDepartment of Human Genetics, Centre for Human Genetics, University Hospitals Leuven, Leuven, 3000, Belgium. eftychia.dimitriadou@uzleuven.be.ORCID http://orcid.org/0000-0003-2845-0057
KU Leuven · BECliniques Universitaires Saint-Luc · BEAZ Sint-Jan · BECentre For Human Genetics · INLeuven Institute for Fertility and Embryology · BEUniversity of Tartu · EE

Funding

EC | EC Seventh Framework Programm | FP7 People: Marie-Curie Actions (FP7-PEOPLE - Specific Programme "People" Implementing the Seventh Framework Programme of the European Community for Research, Technological Development and Demonstration Activities (2007 to 2013)) EU324509Fonds Wetenschappelijk Onderzoek (Research Foundation Flanders) 11A7119N
6 · The paper itself

Abstract

Chromosome instability is inherent to human IVF embryos, but the full spectrum and developmental fate of chromosome anomalies remain uncharacterized. Using haplotyping-based preimplantation genetic testing for monogenic diseases (PGT-M), we mapped the parental and mechanistic origin of common and rare genomic abnormalities in 2300 cleavage stage and 361 trophectoderm biopsies. We show that while single whole chromosome aneuploidy arises due to chromosome-specific meiotic errors in the oocyte, segmental imbalances predominantly affect paternal chromosomes, implicating sperm DNA damage in segmental aneuploidy formation. We also show that postzygotic aneuploidy affects multiple chromosomes across the genome and does not discriminate between parental homologs. In addition, 6% of cleavage stage embryos demonstrated signatures of tripolar cell division with excessive chromosome loss, however hypodiploid blastomeres can be excluded from further embryo development. This observation supports the selective-pressure hypothesis in embryos. Finally, considering that ploidy violations may constitute a significant proportion of non-viable embryos, using haplotyping-based approach to map these events might further improve IVF success rate.

Identifiers

PMID34620870
PMCPMC8497526
OpenAlexW3202720039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.