Evidence map›Paper›PMID 34620850›Full record

ArticleNature communications2021

Polycomb condensates can promote epigenetic marks but are not required for sustained chromatin compaction.

Jorine M Eeftens, Manya Kapoor, Davide Michieletto, Clifford P Brangwynne

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 94 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Jorine M EeftensDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-6784-9955
Manya KapoorDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-0352-5131
Davide MichielettoSUPA, School of Physics and Astronomy, University of Edinburgh, Edinburgh, Scotland.
Clifford P BrangwynneDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, USA. cbrangwy@princeton.edu.ORCID 0000-0002-1350-9960
Princeton University · USHoward Hughes Medical Institute · USInstitute of Genetics and Cancer · GB

Funding

Optogenetic Droplets: Using Light to Control Nucleoplasmic Phase SeparationU01DA040601 · NIDA · PRINCETON UNIVERSITY · PI BRANGWYNNE, CLIFFORD P · 2015 to 2019
$1.4M
Howard Hughes Medical InstituteNIDA NIH HHS U01 DA040601
6 · The paper itself

Abstract

Organization of the genome into transcriptionally active euchromatin and silenced heterochromatin is essential for eukaryotic cell function. Phase-separation has been implicated in heterochromatin formation, but it is unclear how phase-separated condensates can contribute to stable repression, particularly for heritable epigenetic changes. Polycomb complex PRC1 is key for heterochromatin formation, but the multitude of Polycomb proteins has hindered our understanding of their collective contribution to chromatin repression. Here, we show that PRC1 forms multicomponent condensates through hetero-oligomerization. They preferentially seed at H3K27me3 marks, and subsequently write H2AK119Ub marks. We show that inducing Polycomb phase-separation can cause chromatin compaction, but polycomb condensates are dispensable for maintenance of the compacted state. Our data and simulations are consistent with a model in which the time integral of Polycomb phase-separation is progressively recorded in repressive histone marks, which subsequently drive compaction. These findings link the equilibrium thermodynamics of phase-separation with the fundamentally non-equilibrium concept of epigenetic memory.

Indexed as

Epigenesis, GeneticCell Cycle ProteinsChromatinChromatin Assembly and DisassemblyHEK293 CellsHeterochromatinHistonesHumansMicrotubule-Associated ProteinsPolycomb-Group ProteinsPolycomb Repressive Complex 1UbiquitinationCell Cycle ProteinsChromatinHeterochromatinHistonesMicrotubule-Associated ProteinsPolycomb-Group ProteinsPolycomb Repressive Complex 1PRC1 protein, human

Identifiers

PMID34620850
PMCPMC8497513
OpenAlexW3203089164

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.