Evidence map›Paper›PMID 34620709›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Hinfp is a guardian of the somatic genome by repressing transposable elements.

Niraj K Nirala, Qi Li, Prachi N Ghule, Hsi-Ju Chen, Rui Li, Lihua Julie Zhu, Ruijia Wang, Nicholas P Rice, Junhao Mao, Janet L Stein and 3 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Cell-cycle-regulated transcriptional pausing ofMolecular biology of the cell · 2025
    Article
  5. Review
  6. Article
  7. Cell cycle-regulated transcriptional pausing ofbioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. A Cytological F1 RNAi Screen for Defects inbioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Niraj K NiralaProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0002-5226-0459
Qi LiProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0001-7786-6839
Prachi N GhuleDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405.
Hsi-Ju ChenProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.
Rui LiDepartment of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0003-3193-1396
Lihua Julie ZhuProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0001-7416-0590
Ruijia WangProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.
Nicholas P RiceProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605.ORCID 0000-0002-9023-6820
Junhao MaoDepartment of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605.
Janet L SteinDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405.ORCID 0000-0002-2474-6822
Gary S SteinDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, VT 05405.ORCID 0000-0001-8762-5422
Andre J van WijnenDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55905.ORCID 0000-0002-4458-0946
Y Tony IpProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605; Tony.Ip@umassmed.edu.ORCID 0000-0003-4370-7906
University of Massachusetts Chan Medical School · USUniversity of Vermont · USMayo Clinic in Arizona · US

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
University of Massachusetts Center for Clinical and Translational ScienceUL1TR000161 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2012 to 2015
$11.0M
Genetic analysis of damage-induced intestinal stem cell division in DrosophilaR01DK083450 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 2010 to 2024
$4.7M
Homeostatic signaling in the Drosophila intestineR01GM107457 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 2015 to 2018
$1.3M
NCATS NIH HHS UL1 TR000161NIDDK NIH HHS R01 DK083450NIGMS NIH HHS R01 GM107457NIH HHS P40 OD018537
6 · The paper itself

Abstract

Germ cells possess the Piwi-interacting RNA pathway to repress transposable elements and maintain genome stability across generations. Transposable element mobilization in somatic cells does not affect future generations, but nonetheless can lead to pathological outcomes in host tissues. We show here that loss of function of the conserved zinc-finger transcription factor Hinfp causes dysregulation of many host genes and derepression of most transposable elements. There is also substantial DNA damage in somatic tissues of

Indexed as

AnimalsChromatinChromatin Assembly and DisassemblyDNA Transposable ElementsDrosophila melanogasterGene Expression Regulation, DevelopmentalGenomic InstabilityHistonesRepressor ProteinsRNA, Small InterferingTranscription FactorsChromatinDNA Transposable ElementsHistonesRepressor ProteinsRNA, Small InterferingTranscription FactorsDrosophilagenome stabilityHinfpsomatictransposable elements

Identifiers

PMID34620709
PMCPMC8521681
OpenAlexW3202722597

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.