Evidence map›Paper›PMID 34620690›Full record

ArticleCancer discovery2022

Integrative RNA-omics Discovers GNAS Alternative Splicing as a Phenotypic Driver of Splicing Factor-Mutant Neoplasms.

Emily C Wheeler, Shailee Vora, Daniel Mayer, Andriana G Kotini, Malgorzata Olszewska, Samuel S Park, Ernesto Guccione, Julie Teruya-Feldstein, Lewis Silverman, Roger K Sunahara and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Article
  3. U2af1Leukemia · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Decoding cancer etiology with cellular reprogramming.Current opinion in genetics & development · 2025
    Review
  17. Aberrant pre-mRNA processing in cancer.The Journal of experimental medicine · 2024
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Emily C Wheeler *Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California.
Shailee Vora *Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-2534-9052
Daniel MayerDepartment of Pharmacology, University of California San Diego School of Medicine, La Jolla, California.
Andriana G KotiniDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Malgorzata OlszewskaDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Samuel S ParkDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California.ORCID 0000-0002-9230-7661
Ernesto GuccioneDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Julie Teruya-FeldsteinDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-0033-445X
Lewis SilvermanTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, New York.
Roger K SunaharaDepartment of Pharmacology, University of California San Diego School of Medicine, La Jolla, California.
Gene W YeoDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California.
Eirini P PapapetrouDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.
Icahn School of Medicine at Mount Sinai · USUniversity of California San Diego · US

Funding

Functional RNA elements in the human genomeR01HG004659 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Kevin Daniel Corbett, Eugene Wei-Ming Yeo · 2008 to 2026
$12.4M
A Comprehensive Functional Map of Human Protein-RNA InteractionsU41HG009889 · NHGRI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRAVELEY, BRENTON R. · 2018 to 2021
$9.4M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Structure and dynamics of G protein coupled receptor-G protein complexesR01GM083118 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOBILKA, BRIAN K, SKINIOTIS, GEORGIOS · 2008 to 2023
$8.3M
A comprehensive binding and functional map of human RNA-binding proteinsU24HG009889 · NHGRI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRAVELEY, BRENTON R., YEO, EUGENE WEI-MING · 2022 to 2025
$5.5M
Dissecting splicing factor mutations in iPSCsR01HL137219 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PAPAPETROU, EIRINI, YEO, EUGENE WEI-MING · 2017 to 2020
$3.2M
Identification of therapeutic targets for leukemia stem cells in AML-iPSC modelsR01CA225231 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KHARAS, MICHAEL, PAPAPETROU, EIRINI · 2018 to 2022
$3.2M
Analysis of RNA binding proteins directing hematopoietic stem cell fateR01HL137223 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOPE, KRISTIN, YEO, EUGENE WEI-MING · 2018 to 2021
$2.5M
Modeling chromosome 7 loss in Myelodysplasia-iPSCsR01HL121570 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PAPAPETROU, EIRINI · 2014 to 2018
$2.1M
Modeling Splicing Factor Mutations in MDS Using Human iPSCsF31CA228295 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI VORA, SHAILEE · 2018 to 2020
$132k
NCI NIH HHS F31 CA228295NCI NIH HHS R01 CA225231NHGRI NIH HHS R01 HG004659NHGRI NIH HHS U24 HG009889NHGRI NIH HHS U41 HG009889NHLBI NIH HHS R01 HL121570NHLBI NIH HHS R01 HL137219NHLBI NIH HHS R01 HL137223NIGMS NIH HHS R01 GM083118NIGMS NIH HHS T32 GM008666
6 · The paper itself

Abstract

Mutations in splicing factors (SF) are the predominant class of mutations in myelodysplastic syndrome (MDS), but convergent downstream disease drivers remain elusive. To identify common direct targets of missplicing by mutant U2AF1 and SRSF2, we performed RNA sequencing and enhanced version of the cross-linking and immunoprecipitation assay in human hematopoietic stem/progenitor cells derived from isogenic induced pluripotent stem cell (iPSC) models. Integrative analyses of alternative splicing and differential binding converged on a long isoform of GNAS (GNAS-L), promoted by both mutant factors. MDS population genetics, functional and biochemical analyses support that GNAS-L is a driver of MDS and encodes a hyperactive long form of the stimulatory G protein alpha subunit, Gαs-L, that activates ERK/MAPK signaling. SF-mutant MDS cells have activated ERK signaling and consequently are sensitive to MEK inhibitors. Our findings highlight an unexpected and unifying mechanism by which SRSF2 and U2AF1 mutations drive oncogenesis with potential therapeutic implications for MDS and other SF-mutant neoplasms. SIGNIFICANCE: SF mutations are disease-defining in MDS, but their critical effectors remain unknown. We discover the first direct target of convergent missplicing by mutant U2AF1 and SRSF2, a long GNAS isoform, which activates G protein and ERK/MAPK signaling, thereby driving MDS and rendering mutant cells sensitive to MEK inhibition. This article is highlighted in the In This Issue feature, p. 587.

Indexed as

Myelodysplastic SyndromesNeoplasmsAlternative SplicingChromograninsGTP-Binding Protein alpha Subunits, GsHumansMitogen-Activated Protein Kinase KinasesMutationRNARNA SplicingRNA Splicing FactorsSerine-Arginine Splicing FactorsSplicing Factor U2AFChromograninsGNAS protein, humanGTP-Binding Protein alpha Subunits, GsMitogen-Activated Protein Kinase KinasesRNARNA Splicing FactorsSerine-Arginine Splicing FactorsSplicing Factor U2AF

Identifiers

PMID34620690
PMCPMC8904276
OpenAlexW3203201080

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.