Evidence map›Paper›PMID 34618668›Full record

ArticleIEEE transactions on bio-medical engineering2022

A Minimally Interactive Method for Labeling Respiratory Phases in Free-Breathing Thoracic Dynamic MRI for Constructing 4D Images.

Changjian Sun, Jayaram K Udupa, Yubing Tong, Caiyun Wu, Shuxu Guo, Joseph M McDonough, Drew A Torigian, Patrick J Cahill

Abstract read
In one paragraph

Article in IEEE transactions on bio-medical engineering, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Changjian Sun
Jayaram K Udupa
Yubing Tong
Caiyun Wu
Shuxu Guo
Joseph M McDonough
Drew A Torigian
Patrick J Cahill

Funding

Phenotypic Diversity in COVID-19UL1TR001878 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2016 to 2025
$102.4M
Virtual growing child 5-dimensional functional models for treating respiratory anomaliesR01HL150147 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI TORIGIAN, DREW, UDUPA, JAYARAM K · 2020 to 2023
$3.1M
NCATS NIH HHS UL1 TR001878NHLBI NIH HHS R01 HL150147
6 · The paper itself

Abstract

objectiveDetermination of end-expiration (EE) and end-inspiration (EI) time points in the respiratory cycle in free-breathing slice image acquisitions of the thorax is one key step needed for 4D image construction via dynamic magnetic resonance imaging. The purpose of this paper is to realize the automation of the labeling process.

methodsThe diaphragm is used as a surrogate for tracking respiratory motion and determining the state of breathing. Regions of interest (ROIs) containing the hemi-diaphragms are set by human interaction to compute the optical flow matrix between two adjacent 2D time slices. Subsequently, our approach examines the diaphragm speed and direction and by considering the change in the optical flow matrix, the EE or EI points are detected. RESULTS AND

conclusionThe labeling accuracy for the lateral aspect of the left lung and the lateral aspect of the right lung (0.63±0.71) is significantly lower (P < 0.05) than the accuracy for other positions (0.42±0.44), but the error in almost all scenarios is less than 1 time point. By comparing between automatic and manual labeling in 12 scenarios, we found out that 9 scenarios showed no significant difference (P > 0.05) between two methods. Overall, our method is found to be highly agreeable with manual labeling and greatly shortens the labeling time, requiring less than 8 minutes/ study compared to 4 hours/ study for manual labeling. SIGNIFICANCE: Our method achieves automatic labeling of EE and EI points without the need for use of patientinternal or external markers.

Indexed as

Magnetic Resonance ImagingRespirationDiaphragmHumansMotionThorax

Identifiers

PMID34618668
PMCPMC8990545

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.