Evidence map›Paper›PMID 34617965›Full record

ArticleThe Journal of cell biology2021

Neuronal activity regulates the nuclear proteome to promote activity-dependent transcription.

Wendy A Herbst, Weixian Deng, James A Wohlschlegel, Jennifer M Achiro, Kelsey C Martin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Activity-Induced Cortical Glutamatergic Neuron Nascent Proteins.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wendy A HerbstNeuroscience Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA.
Weixian DengDepartment of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA.ORCID 0000-0003-2597-2255
James A WohlschlegelDepartment of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA.
Jennifer M AchiroDepartment of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA.ORCID 0000-0002-3978-1647
Kelsey C MartinDepartment of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA.ORCID 0000-0003-0932-563X
University of California, Los Angeles · US

Funding

UCLA Training Program in Translational Neuroscience of Drug Abuse (TNDA)T32DA024635 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LARA A. RAY, Kate M Wassum · 2008 to 2026
$6.2M
Proteolytic Control of Iron Metabolism by the Ubiquitin Ligase FBXL5R01GM089778 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WOHLSCHLEGEL, JAMES AKIRA · 2010 to 2023
$4.0M
Synapse to Nuclear Signaling During Long-Lasting Neuronal PlasticityR01MH077022 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MARTIN, KELSEY C · 2007 to 2017
$3.1M
The role of synaptonuclear signaling proteins in long-term hippocampal synaptic plasticityF31MH113310 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HERBST, WENDY · 2017 to 2019
$108k
NIDA NIH HHS T32 DA024635NIGMS NIH HHS R01 GM089778NIH HHS R01MH077022NIMH NIH HHS F31 MH113310NIMH NIH HHS R01 MH077022
6 · The paper itself

Abstract

The formation and plasticity of neuronal circuits relies on dynamic activity-dependent gene expression. Although recent work has revealed the identity of important transcriptional regulators and of genes that are transcribed and translated in response to activity, relatively little is known about the cell biological mechanisms by which activity alters the nuclear proteome of neurons to link neuronal stimulation to transcription. Using nucleus-specific proteomic mapping in silenced and stimulated neurons, we uncovered an understudied mechanism of nuclear proteome regulation: activity-dependent proteasome-mediated degradation. We found that the tumor suppressor protein PDCD4 undergoes rapid stimulus-induced degradation in the nucleus of neurons. We demonstrate that degradation of PDCD4 is required for normal activity-dependent transcription and that PDCD4 target genes include those encoding proteins critical for synapse formation, remodeling, and transmission. Our findings highlight the importance of the nuclear proteasome in regulating the activity-dependent nuclear proteome and point to a specific role for PDCD4 as a regulator of activity-dependent transcription in neurons.

Indexed as

Transcription, GeneticAnimalsApoptosis Regulatory ProteinsAscorbate PeroxidasesBiotinylationCell NucleusGene Expression RegulationHumansMass SpectrometryMutationNeuronsProtein Kinase CProteolysisProteomeRatsRats, Sprague-DawleyApoptosis Regulatory ProteinsAscorbate PeroxidasesPdcd4 protein, ratProtein Kinase CProteome

Identifiers

PMID34617965
PMCPMC8504181
OpenAlexW3204703660

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.