Evidence map›Paper›PMID 34617657›Full record

ArticleGenesis (New York, N.Y. : 2000)2021

Conserved germ plasm characteristics across the Danio and Devario lineages.

Christina L Hansen, Trevor J Chamberlain, Ryan L Trevena, Jacob E Kurek, Francisco Pelegri

Open access · greenAbstract read
In one paragraph

Article in Genesis (New York, N.Y. : 2000), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Christina L HansenLaboratory of Genetics, University of Wisconsin - Madison, Madison, Wisconsin, USA.ORCID 0000-0001-7424-5842
Trevor J ChamberlainLaboratory of Genetics, University of Wisconsin - Madison, Madison, Wisconsin, USA.
Ryan L TrevenaLaboratory of Genetics, University of Wisconsin - Madison, Madison, Wisconsin, USA.
Jacob E KurekLaboratory of Genetics, University of Wisconsin - Madison, Madison, Wisconsin, USA.
Francisco PelegriLaboratory of Genetics, University of Wisconsin - Madison, Madison, Wisconsin, USA.
University of Wisconsin–Madison · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
Diversity Supplement: Cytokinesis and RNA segregation in zebrafish developmentR01GM065303 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PELEGRI, FRANCISCO J · 2002 to 2023
$4.7M
Cytokinesis and RNA Segregation in Zebrafish DevelopmentR56GM065303 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PELEGRI, FRANCISCO J · 2007 to 2007
$254k
NIGMS NIH HHS R01 GM065303NIGMS NIH HHS R56 GM065303NIGMS NIH HHS T32 GM007133
6 · The paper itself

Abstract

In many animal species, germ cell specification requires the inheritance of germ plasm, a biomolecular condensate containing maternally derived RNAs and proteins. Most studies of germ plasm composition and function have been performed in widely evolutionarily divergent model organisms, such as Caenorhabditis elegans, Drosophila, Xenopus laevis, and Danio rerio (zebrafish). In zebrafish, 12 RNAs localize to germ plasm at the furrows of the early embryo. Here, we tested for the presence of these RNAs in three additional species within the Danionin clade: Danio kyathit, Danio albolineatus, and Devario aequipinnatus. By visualizing nanos RNA, we find that germ plasm segregation patterns during early embryogenesis are conserved across these species. Ten additional germ plasm RNAs exhibit localization at the furrows of early embryos in all three non-zebrafish Danionin species, consistent with germ plasm localization. One component of zebrafish germ plasm, ca15b, lacked specific localization in embryos of the more distantly related D. aequipinnatus. Our findings show that within a subset of closely related Danionin species, the vast majority of germ plasm RNA components are conserved. At the same time, the lack of ca15b localization in D. aequipinnatus germ plasm highlights the potential for the divergence of germ plasm composition across a restricted phylogenetic space.

Indexed as

Evolution, MolecularAnimalsCaenorhabditis elegansConserved SequenceDrosophilaEmbryonic DevelopmentEmbryo, NonmammalianGerm CellsPhylogenyRNAXenopus laevisZebrafishRNADanioninembryonic developmentevolutiongermlineprimordial germ cellszebrafish

Identifiers

PMID34617657
PMCPMC8651028
OpenAlexW3204328394

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.